Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.15□□□□□ -1.91
LDB2O43679 AC125238.1-201ENST00000448842 249 ntBASIC3.15□□□□□ -1.91
LDB2O43679 AC012181.1-201ENST00000479895 423 ntBASIC3.15□□□□□ -1.91
LDB2O43679 RPL21P93-201ENST00000480465 489 ntBASIC3.15□□□□□ -1.91
LDB2O43679 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB2O43679 AC112206.3-201ENST00000514578 389 ntBASIC3.15□□□□□ -1.91
LDB2O43679 RNU4-49P-201ENST00000516080 140 ntBASIC3.15□□□□□ -1.91
LDB2O43679 RNU6-914P-201ENST00000516749 109 ntBASIC3.15□□□□□ -1.91
LDB2O43679 RNU7-30P-201ENST00000516835 62 ntBASIC3.15□□□□□ -1.91
LDB2O43679 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB2O43679 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.15□□□□□ -1.91
LDB2O43679 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB2O43679 ATP5F1P5-201ENST00000526403 760 ntBASIC3.15□□□□□ -1.91
LDB2O43679 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
LDB2O43679 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB2O43679 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
LDB2O43679 MIR4742-201ENST00000581069 85 ntBASIC3.15□□□□□ -1.91
LDB2O43679 BNIP3P25-201ENST00000596023 559 ntBASIC3.15□□□□□ -1.91
LDB2O43679 AC092747.3-201ENST00000603769 301 ntBASIC3.15□□□□□ -1.91
LDB2O43679 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.15□□□□□ -1.91
LDB2O43679 MIR8057-201ENST00000620957 69 ntBASIC3.15□□□□□ -1.91
LDB2O43679 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.15□□□□□ -1.91
LDB2O43679 AP003400.5-201ENST00000624827 617 ntBASIC3.15□□□□□ -1.91
LDB2O43679 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LDB2O43679 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LDB2O43679 AC008568.2-201ENST00000623862 2313 ntBASIC3.15□□□□□ -1.91
LDB2O43679 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
LDB2O43679 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LDB2O43679 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LDB2O43679 ZNF826P-207ENST00000622273 1910 ntBASIC3.15□□□□□ -1.91
LDB2O43679 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB2O43679 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.14□□□□□ -1.91
LDB2O43679 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LDB2O43679 RNU6-1167P-201ENST00000363227 94 ntBASIC3.14□□□□□ -1.91
LDB2O43679 U3.6-201ENST00000363622 211 ntBASIC3.14□□□□□ -1.91
LDB2O43679 RNU6-393P-201ENST00000384475 107 ntBASIC3.14□□□□□ -1.91
LDB2O43679 Y_RNA.529-201ENST00000384586 119 ntBASIC3.14□□□□□ -1.91
LDB2O43679 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LDB2O43679 HSPE1P1-201ENST00000421494 318 ntBASIC3.14□□□□□ -1.91
LDB2O43679 AL353678.1-201ENST00000422735 741 ntBASIC3.14□□□□□ -1.91
LDB2O43679 MTND4P28-201ENST00000426217 387 ntBASIC3.14□□□□□ -1.91
LDB2O43679 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB2O43679 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB2O43679 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB2O43679 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB2O43679 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB2O43679 PRPS1P1-201ENST00000445305 876 ntBASIC3.14□□□□□ -1.91
LDB2O43679 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB2O43679 RNU6-329P-201ENST00000459618 107 ntBASIC3.14□□□□□ -1.91
LDB2O43679 RN7SL863P-201ENST00000462370 296 ntBASIC3.14□□□□□ -1.91
LDB2O43679 RPL31P60-201ENST00000478450 367 ntBASIC3.14□□□□□ -1.91
LDB2O43679 RPS29P2-201ENST00000479278 136 ntBASIC3.14□□□□□ -1.91
LDB2O43679 AC083904.1-201ENST00000487828 231 ntBASIC3.14□□□□□ -1.91
LDB2O43679 RN7SL504P-201ENST00000494496 287 ntBASIC3.14□□□□□ -1.91
LDB2O43679 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.14□□□□□ -1.91
LDB2O43679 FGF7P4-201ENST00000509595 295 ntBASIC3.14□□□□□ -1.91
LDB2O43679 RNU6-189P-201ENST00000516120 101 ntBASIC3.14□□□□□ -1.91
LDB2O43679 RNA5SP468-201ENST00000516782 93 ntBASIC3.14□□□□□ -1.91
LDB2O43679 RNA5SP471-201ENST00000516971 106 ntBASIC3.14□□□□□ -1.91
LDB2O43679 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB2O43679 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB2O43679 MTCO3P23-201ENST00000561363 289 ntBASIC3.14□□□□□ -1.91
LDB2O43679 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB2O43679 AC012493.2-201ENST00000595083 291 ntBASIC3.14□□□□□ -1.91
LDB2O43679 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB2O43679 AC098826.3-201ENST00000603823 466 ntBASIC3.14□□□□□ -1.91
LDB2O43679 AC106900.2-201ENST00000604994 317 ntBASIC3.14□□□□□ -1.91
LDB2O43679 YPEL5P2-201ENST00000605553 359 ntBASIC3.14□□□□□ -1.91
LDB2O43679 AL022345.1-201ENST00000607292 135 ntBASIC3.14□□□□□ -1.91
LDB2O43679 U2.17-201ENST00000611454 95 ntBASIC3.14□□□□□ -1.91
LDB2O43679 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.14□□□□□ -1.91
LDB2O43679 AC018692.3-201ENST00000623929 123 ntBASIC3.14□□□□□ -1.91
LDB2O43679 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LDB2O43679 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
LDB2O43679 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LDB2O43679 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LDB2O43679 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LDB2O43679 AL136164.4-201ENST00000625013 2135 ntBASIC3.13□□□□□ -1.91
LDB2O43679 DEFB109C-201ENST00000382575 264 ntBASIC3.13□□□□□ -1.91
LDB2O43679 DEFB109B-201ENST00000382656 264 ntBASIC3.13□□□□□ -1.91
LDB2O43679 RNU6-741P-201ENST00000383889 107 ntBASIC3.13□□□□□ -1.91
LDB2O43679 Y_RNA.414-201ENST00000384011 101 ntBASIC3.13□□□□□ -1.91
LDB2O43679 RNU6-434P-201ENST00000384376 107 ntBASIC3.13□□□□□ -1.91
LDB2O43679 RNU6-831P-201ENST00000384548 107 ntBASIC3.13□□□□□ -1.91
LDB2O43679 SNORA16.2-201ENST00000390991 127 ntBASIC3.13□□□□□ -1.91
LDB2O43679 BX682237.1-201ENST00000415016 335 ntBASIC3.13□□□□□ -1.91
LDB2O43679 NDUFB4P5-201ENST00000415445 361 ntBASIC3.13□□□□□ -1.91
LDB2O43679 BTF3L4P3-201ENST00000418879 476 ntBASIC3.13□□□□□ -1.91
LDB2O43679 NCOR1P3-201ENST00000420479 303 ntBASIC3.13□□□□□ -1.91
LDB2O43679 RPS15AP6-201ENST00000420703 385 ntBASIC3.13□□□□□ -1.91
LDB2O43679 AL669831.1-202ENST00000428504 417 ntBASIC3.13□□□□□ -1.91
LDB2O43679 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.13□□□□□ -1.91
LDB2O43679 GTF2IP13-201ENST00000438487 386 ntBASIC3.13□□□□□ -1.91
LDB2O43679 UBE2V1P7-201ENST00000446395 340 ntBASIC3.13□□□□□ -1.91
LDB2O43679 MRPL50P4-201ENST00000446432 475 ntBASIC3.13□□□□□ -1.91
LDB2O43679 AC092001.1-201ENST00000453012 261 ntBASIC3.13□□□□□ -1.91
LDB2O43679 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.13□□□□□ -1.91
LDB2O43679 AMD1P1-201ENST00000457220 922 ntBASIC3.13□□□□□ -1.91
LDB2O43679 RNU7-66P-201ENST00000459469 62 ntBASIC3.13□□□□□ -1.91
LDB2O43679 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms