Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AP002791.1-201ENST00000623291 381 ntBASIC2.28□□□□□ -2.04
MSH4O15457 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.28□□□□□ -2.04
MSH4O15457 AC110994.2-201ENST00000635481 492 ntBASIC2.28□□□□□ -2.04
MSH4O15457 Z99571.1-201ENST00000636677 394 ntBASIC2.28□□□□□ -2.04
MSH4O15457 U6.99-201ENST00000637524 83 ntBASIC2.28□□□□□ -2.04
MSH4O15457 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
MSH4O15457 AC080128.1-201ENST00000474389 1917 ntBASIC2.27□□□□□ -2.05
MSH4O15457 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MSH4O15457 RNU6-188P-201ENST00000364207 107 ntBASIC2.27□□□□□ -2.05
MSH4O15457 RNA5SP160-201ENST00000364866 120 ntBASIC2.27□□□□□ -2.05
MSH4O15457 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
MSH4O15457 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MSH4O15457 USP9YP27-201ENST00000418455 438 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.27□□□□□ -2.05
MSH4O15457 AL591212.2-201ENST00000433923 257 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AL161651.1-201ENST00000440882 223 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.27□□□□□ -2.05
MSH4O15457 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.27□□□□□ -2.05
MSH4O15457 FDX1P2-201ENST00000450769 375 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AC233279.1-201ENST00000455300 423 ntBASIC2.27□□□□□ -2.05
MSH4O15457 RPL38P4-201ENST00000502376 214 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.27□□□□□ -2.05
MSH4O15457 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.27□□□□□ -2.05
MSH4O15457 SNORA31.6-201ENST00000516241 130 ntBASIC2.27□□□□□ -2.05
MSH4O15457 RNU6-677P-201ENST00000516914 101 ntBASIC2.27□□□□□ -2.05
MSH4O15457 BTF3P12-201ENST00000519620 469 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.27□□□□□ -2.05
MSH4O15457 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.27□□□□□ -2.05
MSH4O15457 RANP3-201ENST00000530970 276 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AC090616.2-202ENST00000584248 222 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.27□□□□□ -2.05
MSH4O15457 AL158827.2-201ENST00000602494 330 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AL359999.1-201ENST00000604513 294 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AL365204.3-201ENST00000612448 685 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AC027807.2-201ENST00000616099 408 ntBASIC2.27□□□□□ -2.05
MSH4O15457 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
MSH4O15457 AL691447.3-201ENST00000635020 330 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AL512643.1-201ENST00000635735 524 ntBASIC2.27□□□□□ -2.05
MSH4O15457 MTND5P42-201ENST00000637720 498 ntBASIC2.27□□□□□ -2.05
MSH4O15457 AC010329.5-201ENST00000623497 2174 ntBASIC2.26□□□□□ -2.05
MSH4O15457 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
MSH4O15457 Y_RNA.608-201ENST00000410647 95 ntBASIC2.26□□□□□ -2.05
MSH4O15457 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.26□□□□□ -2.05
MSH4O15457 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.26□□□□□ -2.05
MSH4O15457 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.26□□□□□ -2.05
MSH4O15457 EPS15P1-201ENST00000448836 336 ntBASIC2.26□□□□□ -2.05
MSH4O15457 RPL23AP7-203ENST00000449021 469 ntBASIC2.26□□□□□ -2.05
MSH4O15457 AL021397.1-201ENST00000451806 248 ntBASIC2.26□□□□□ -2.05
MSH4O15457 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.26□□□□□ -2.05
MSH4O15457 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.26□□□□□ -2.05
MSH4O15457 AP000797.1-201ENST00000478870 387 ntBASIC2.26□□□□□ -2.05
MSH4O15457 AC090096.1-201ENST00000489168 390 ntBASIC2.26□□□□□ -2.05
MSH4O15457 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.26□□□□□ -2.05
MSH4O15457 AC005178.1-201ENST00000508392 440 ntBASIC2.26□□□□□ -2.05
MSH4O15457 SNORD19.2-201ENST00000516978 73 ntBASIC2.26□□□□□ -2.05
MSH4O15457 RNU6-1183P-201ENST00000517054 60 ntBASIC2.26□□□□□ -2.05
MSH4O15457 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.26□□□□□ -2.05
MSH4O15457 AL121821.2-201ENST00000556081 394 ntBASIC2.26□□□□□ -2.05
MSH4O15457 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.26□□□□□ -2.05
MSH4O15457 AC135628.1-201ENST00000568867 534 ntBASIC2.26□□□□□ -2.05
MSH4O15457 MTATP6P24-201ENST00000576835 677 ntBASIC2.26□□□□□ -2.05
MSH4O15457 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.26□□□□□ -2.05
MSH4O15457 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.26□□□□□ -2.05
MSH4O15457 SNRPGP19-201ENST00000603826 189 ntBASIC2.26□□□□□ -2.05
MSH4O15457 AL359757.2-201ENST00000624309 274 ntBASIC2.26□□□□□ -2.05
MSH4O15457 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
MSH4O15457 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.26□□□□□ -2.05
MSH4O15457 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
MSH4O15457 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.25□□□□□ -2.05
MSH4O15457 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
MSH4O15457 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.25□□□□□ -2.05
MSH4O15457 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
MSH4O15457 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.25□□□□□ -2.05
MSH4O15457 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
MSH4O15457 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.25□□□□□ -2.05
MSH4O15457 AC093899.1-201ENST00000457984 376 ntBASIC2.25□□□□□ -2.05
MSH4O15457 AL139824.2-201ENST00000458731 1095 ntBASIC2.25□□□□□ -2.05
MSH4O15457 RNU7-125P-201ENST00000458760 62 ntBASIC2.25□□□□□ -2.05
MSH4O15457 MTND4P2-201ENST00000507767 1203 ntBASIC2.25□□□□□ -2.05
MSH4O15457 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.25□□□□□ -2.05
MSH4O15457 RNA5SP337-201ENST00000517007 109 ntBASIC2.25□□□□□ -2.05
MSH4O15457 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
MSH4O15457 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.25□□□□□ -2.05
MSH4O15457 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.25□□□□□ -2.05
MSH4O15457 AP003181.2-201ENST00000528941 181 ntBASIC2.25□□□□□ -2.05
MSH4O15457 AC084851.1-201ENST00000529105 249 ntBASIC2.25□□□□□ -2.05
MSH4O15457 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.25□□□□□ -2.05
MSH4O15457 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.25□□□□□ -2.05
MSH4O15457 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.25□□□□□ -2.05
MSH4O15457 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.25□□□□□ -2.05
MSH4O15457 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.25□□□□□ -2.05
MSH4O15457 AC008015.1-201ENST00000555505 465 ntBASIC2.25□□□□□ -2.05
MSH4O15457 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.25□□□□□ -2.05
MSH4O15457 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.25□□□□□ -2.05
MSH4O15457 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.25□□□□□ -2.05
MSH4O15457 AC091152.3-201ENST00000604227 325 ntBASIC2.25□□□□□ -2.05
MSH4O15457 AL031775.1-201ENST00000607014 887 ntBASIC2.25□□□□□ -2.05
MSH4O15457 AC022893.3-201ENST00000607665 437 ntBASIC2.25□□□□□ -2.05
MSH4O15457 AC009318.2-201ENST00000610917 651 ntBASIC2.25□□□□□ -2.05
MSH4O15457 AC087683.2-201ENST00000611384 326 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms