Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 SNORD114-24-201ENST00000365029 72 ntBASIC0.06□□□□□ -2.4
LINC01549A6NIU2 MTATP6P31-201ENST00000406985 692 ntBASIC0.06□□□□□ -2.4
LINC01549A6NIU2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 FABP5P14-201ENST00000437273 393 ntBASIC0.06□□□□□ -2.4
LINC01549A6NIU2 AL049734.2-201ENST00000441066 616 ntBASIC0.06□□□□□ -2.4
LINC01549A6NIU2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 RNU6-496P-201ENST00000516145 99 ntBASIC0.06□□□□□ -2.4
LINC01549A6NIU2 COPS8P3-201ENST00000526024 482 ntBASIC0.06□□□□□ -2.4
LINC01549A6NIU2 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 AC091489.2-201ENST00000566263 604 ntBASIC0.06□□□□□ -2.4
LINC01549A6NIU2 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 AC112220.3-201ENST00000605502 502 ntBASIC0.06□□□□□ -2.4
LINC01549A6NIU2 AP001596.2-201ENST00000608410 312 ntBASIC0.06□□□□□ -2.4
LINC01549A6NIU2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.06□□□□□ -2.4
LINC01549A6NIU2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
LINC01549A6NIU2 AC233981.2-201ENST00000611524 1614 ntBASIC0.05□□□□□ -2.4
LINC01549A6NIU2 RNU6-349P-201ENST00000362402 107 ntBASIC0.05□□□□□ -2.4
LINC01549A6NIU2 RNA5SP361-201ENST00000362686 118 ntBASIC0.05□□□□□ -2.4
LINC01549A6NIU2 RNU6-251P-201ENST00000363235 104 ntBASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 MTCO2P12-201ENST00000427426 682 ntBASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AL161788.1-201ENST00000441805 169 ntBASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AC108729.1-201ENST00000487812 947 ntBASIC0.05□□□□□ -2.4
LINC01549A6NIU2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 FAM106DP-201ENST00000586416 501 ntBASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AC073569.3-201ENST00000619055 682 ntBASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AC023934.1-201ENST00000574529 2389 ntBASIC0.05□□□□□ -2.4
LINC01549A6NIU2 AC100821.1-201ENST00000523153 2479 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 RNU6-945P-201ENST00000383947 107 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 MIR597-201ENST00000384968 97 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 RPL17P50-201ENST00000396131 546 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.04□□□□□ -2.4
LINC01549A6NIU2 MTCO1P53-201ENST00000441633 699 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 RN7SL429P-201ENST00000479090 223 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 RN7SL489P-201ENST00000486185 223 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 RN7SL327P-201ENST00000488659 223 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 RNA5SP102-201ENST00000516865 106 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 AC022616.8-201ENST00000533569 253 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.04□□□□□ -2.4
LINC01549A6NIU2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.04□□□□□ -2.4
LINC01549A6NIU2 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.04□□□□□ -2.4
LINC01549A6NIU2 BNIP3P27-201ENST00000599991 412 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 CYP2C61P-201ENST00000604072 290 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.04□□□□□ -2.4
LINC01549A6NIU2 AC090116.1-201ENST00000615679 446 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 RN7SL853P-201ENST00000617250 223 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 AC009033.1-201ENST00000624279 431 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 AC091965.5-201ENST00000624785 342 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 AC092125.1-201ENST00000562568 1995 ntBASIC0.04□□□□□ -2.4
LINC01549A6NIU2 SNORD115-3-201ENST00000363100 82 ntBASIC0.03□□□□□ -2.4
LINC01549A6NIU2 RPS3AP1-201ENST00000413190 320 ntBASIC0.03□□□□□ -2.4
LINC01549A6NIU2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC0.03□□□□□ -2.4
LINC01549A6NIU2 MED14P1-201ENST00000430517 648 ntBASIC0.03□□□□□ -2.4
LINC01549A6NIU2 YWHAZP8-201ENST00000436935 731 ntBASIC0.03□□□□□ -2.4
LINC01549A6NIU2 AC067942.3-201ENST00000512025 362 ntBASIC0.03□□□□□ -2.4
LINC01549A6NIU2 FABP5P5-201ENST00000515537 406 ntBASIC0.03□□□□□ -2.4
LINC01549A6NIU2 SNORA31.17-201ENST00000516953 127 ntBASIC0.03□□□□□ -2.4
LINC01549A6NIU2 AC019176.1-201ENST00000518519 225 ntBASIC0.03□□□□□ -2.4
LINC01549A6NIU2 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.03□□□□□ -2.4
LINC01549A6NIU2 AL138726.1-201ENST00000614873 333 ntBASIC0.03□□□□□ -2.4
LINC01549A6NIU2 AL359854.1-201ENST00000614203 1594 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.02□□□□□ -2.41
LINC01549A6NIU2 RNU6-414P-201ENST00000363705 104 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 SNORA48.1-201ENST00000390879 135 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.02□□□□□ -2.41
LINC01549A6NIU2 MTCYBP12-201ENST00000440559 1134 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 AC104058.1-201ENST00000448028 297 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 KATNBL1P6-201ENST00000453433 915 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 AC108078.1-201ENST00000508073 725 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 AC104057.1-201ENST00000515547 497 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 RN7SKP49-201ENST00000516675 260 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.02□□□□□ -2.41
LINC01549A6NIU2 AC006199.1-201ENST00000548728 219 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.02□□□□□ -2.41
LINC01549A6NIU2 MTATP6P3-201ENST00000581686 676 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 AC025588.3-201ENST00000604182 274 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 AC105129.3-201ENST00000605455 485 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 TUG1_1.1-201ENST00000610654 145 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
LINC01549A6NIU2 AC093913.1-201ENST00000614178 329 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 MTND4P8-201ENST00000514997 1362 ntBASIC0.02□□□□□ -2.41
LINC01549A6NIU2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms