Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC091057.3-201ENST00000602684 733 ntBASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC098483.2-201ENST00000603158 454 ntBASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 ELOCP5-201ENST00000604924 333 ntBASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC016925.2-201ENST00000605108 242 ntBASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL512598.1-201ENST00000610158 273 ntBASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC021755.4-201ENST00000616620 456 ntBASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC006338.1-201ENST00000618453 749 ntBASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC131280.1-202ENST00000624067 4211 ntBASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TRBV6-4A0A1B0GX49 WWP1P1-201ENST00000466609 2769 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 RNU1-17P-201ENST00000363022 152 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 SNORD115-3-201ENST00000363100 82 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 RNU6-512P-201ENST00000364438 103 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL079342.2-201ENST00000403367 482 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC127391.1-201ENST00000411737 98 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC068533.2-201ENST00000411872 306 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 OR51A5P-201ENST00000415429 942 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 EIF4EP2-201ENST00000422816 654 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL357134.1-201ENST00000445848 426 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 RPL18AP17-201ENST00000455326 198 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 HMGN2P23-201ENST00000456759 269 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 RPS29P23-201ENST00000458635 123 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC006512.1-201ENST00000468816 291 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 MTCYBP18-201ENST00000501056 747 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC117532.1-201ENST00000514638 323 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 RNU6-1183P-201ENST00000517054 60 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 ACA59.2-201ENST00000517061 156 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 CYCSP27-201ENST00000527643 293 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC023538.1-201ENST00000534576 736 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 EMP1-206ENST00000537612 505 ntTSL 3 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 MIR5708-201ENST00000579723 85 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 SNRPGP17-201ENST00000603780 214 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC034229.4-201ENST00000607861 441 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL391813.2-201ENST00000609113 322 ntBASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TRBV6-4A0A1B0GX49 AP000776.1-201ENST00000530032 1663 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 Y_RNA.408-201ENST00000383987 102 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 RNU6-1122P-201ENST00000384449 107 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 RNU1-57P-201ENST00000384491 166 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 CISD1P1-201ENST00000393907 327 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 GTF2IP3-201ENST00000433887 494 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC015922.2-201ENST00000435593 184 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 MTND5P14-201ENST00000441481 1267 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL096829.2-201ENST00000446582 742 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 MTND1P31-201ENST00000449206 961 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL353718.1-201ENST00000451028 517 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 FCF1P6-201ENST00000456841 595 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 snoU13.23-201ENST00000458863 104 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 RNA5SP57-201ENST00000459463 123 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC116655.1-201ENST00000508324 901 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 MTCYBP16-201ENST00000509187 1129 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 RNU6-667P-201ENST00000517186 102 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 PSMA3P-201ENST00000555485 635 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL160236.1-201ENST00000556317 195 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 MTCYBP23-201ENST00000558717 1102 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 MIR4303-201ENST00000581299 66 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 AC008121.3-201ENST00000618726 433 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 MIR7843-201ENST00000622274 79 ntBASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.91□□□□□ -2.26
TRBV6-4A0A1B0GX49 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
TRBV6-4A0A1B0GX49 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRBV6-4A0A1B0GX49 RNU6-457P-201ENST00000363999 107 ntBASIC0.9□□□□□ -2.27
TRBV6-4A0A1B0GX49 RNU6-188P-201ENST00000364207 107 ntBASIC0.9□□□□□ -2.27
TRBV6-4A0A1B0GX49 RNU6-1280P-201ENST00000365211 107 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms