Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 Y_RNA.182-201ENST00000363880 111 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 RNU4-84P-201ENST00000364200 139 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 RNU6-898P-201ENST00000365627 104 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 OR1L6-202ENST00000373684 1044 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 RNU6-140P-201ENST00000384566 108 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 RNU2-2P-201ENST00000410396 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 AC006466.1-201ENST00000438721 289 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 AC010095.1-201ENST00000443543 144 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 MTATP6P7-201ENST00000453315 681 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 RNU6-625P-201ENST00000459412 107 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 RPL23AP14-201ENST00000468281 468 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 AC097484.1-201ENST00000471148 389 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 AC022795.1-201ENST00000473808 480 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 AC097462.2-201ENST00000504623 481 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 AC020593.1-201ENST00000507399 299 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 SNORA70.16-201ENST00000516390 95 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 MIR3934-201ENST00000579806 107 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 SNRPGP15-201ENST00000600149 222 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 RNU2-4P-201ENST00000606190 192 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 U2.15-201ENST00000611544 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 U2.16-201ENST00000613119 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 U2.12-201ENST00000613778 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 U2.9-201ENST00000615427 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 U2.11-201ENST00000616345 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 U2.2-201ENST00000616535 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 U2.3-201ENST00000617785 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 U2.19-201ENST00000618602 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 RNU2-1-201ENST00000618664 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 U2.6-201ENST00000619225 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 U2.5-201ENST00000619465 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 U2.10-201ENST00000620268 191 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 AC008079.2-201ENST00000623543 20396 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 INTS6P1-201ENST00000504674 2530 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 RNU6-151P-201ENST00000364158 107 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 RNU4-17P-201ENST00000365598 141 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 RNU6-1310P-201ENST00000384153 107 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 Y_RNA.498-201ENST00000384460 102 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 SNORA66-201ENST00000384792 133 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 MIR124-3-201ENST00000384866 87 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 MIR186-201ENST00000384988 86 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 U3.19-201ENST00000390893 196 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 AL035079.1-201ENST00000405210 287 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 BTF3P11-201ENST00000426582 477 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 RPS29P10-201ENST00000439197 166 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 MIR5571-201ENST00000577998 113 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 MIR4691-201ENST00000583764 85 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 AC020895.1-201ENST00000595362 272 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 Y_RNA.778-201ENST00000620203 90 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 MARK2P15-201ENST00000432204 2186 ntBASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HRH3Q9Y5N1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 AC022893.2-201ENST00000564832 3296 ntBASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 OR51H2P-202ENST00000641424 3046 ntBASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 RNU1-108P-201ENST00000362556 161 ntBASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 Y_RNA.75-201ENST00000362927 97 ntBASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 RNA5SP455-201ENST00000365190 119 ntBASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 EIF4A1P3-201ENST00000411521 244 ntBASIC4.68□□□□□ -1.66
HRH3Q9Y5N1 RPS12P23-201ENST00000419579 400 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms