Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 RAC1P6-201ENST00000423911 575 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 MYL8P-204ENST00000431574 518 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 AL591704.1-201ENST00000432574 275 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 AP000949.1-201ENST00000438328 629 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 MTND6P13-201ENST00000443510 523 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 AL078601.1-201ENST00000444542 271 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 UBE2DNL-203ENST00000474922 222 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 RPL7P43-201ENST00000478876 753 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 AC009902.1-201ENST00000519351 183 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 MTND1P36-201ENST00000522384 936 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 OR5AL2P-201ENST00000532185 920 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 AL391001.1-201ENST00000602747 715 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 AC107952.2-201ENST00000606048 486 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 SNORD114-19-201ENST00000363072 75 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 RNU6-701P-201ENST00000384059 107 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 MIR518A2-201ENST00000384966 87 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 MIR518D-201ENST00000385014 87 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 RPL17P50-201ENST00000396131 546 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AC078974.1-201ENST00000411597 223 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AL139156.1-201ENST00000412785 841 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AL356320.1-201ENST00000429616 163 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 MTND2P29-201ENST00000438595 412 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 RPL7P18-201ENST00000478965 734 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AC104090.1-201ENST00000506341 1171 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 RNU6-678P-201ENST00000516832 109 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AC136618.2-201ENST00000575091 400 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AC126118.1-201ENST00000607744 628 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AL773524.1-201ENST00000614065 229 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 AC010378.1-201ENST00000619270 362 ntBASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.79□□□□□ -2.12
RHBDD3Q9Y3P4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 HSPE1P11-201ENST00000339579 310 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 RNU6-898P-201ENST00000365627 104 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 SNORA40.4-201ENST00000390971 128 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 SNORA40C-201ENST00000391285 128 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 Z98742.3-201ENST00000418637 326 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AL137159.1-201ENST00000452808 512 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 RPL23AP42-201ENST00000471152 471 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 SNORA31.19-201ENST00000517079 126 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AC109329.1-201ENST00000518744 317 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 OR5B19P-201ENST00000531766 928 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AC136619.2-201ENST00000563361 631 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AC174048.1-201ENST00000603389 144 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AC009314.1-201ENST00000603871 304 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AL365204.3-201ENST00000612448 685 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AL512643.1-201ENST00000635735 524 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 Z99571.1-201ENST00000636677 394 ntBASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RHBDD3Q9Y3P4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.77□□□□□ -2.13
RHBDD3Q9Y3P4 RNA5SP276-201ENST00000362580 94 ntBASIC1.77□□□□□ -2.13
RHBDD3Q9Y3P4 RNU6-723P-201ENST00000383973 107 ntBASIC1.77□□□□□ -2.13
RHBDD3Q9Y3P4 SNORA67.3-201ENST00000384366 140 ntBASIC1.77□□□□□ -2.13
RHBDD3Q9Y3P4 MIR29C-201ENST00000385231 88 ntBASIC1.77□□□□□ -2.13
RHBDD3Q9Y3P4 AL023284.1-201ENST00000403956 276 ntBASIC1.77□□□□□ -2.13
RHBDD3Q9Y3P4 RN7SKP32-201ENST00000410167 303 ntBASIC1.77□□□□□ -2.13
RHBDD3Q9Y3P4 RNU2-62P-201ENST00000410868 191 ntBASIC1.77□□□□□ -2.13
RHBDD3Q9Y3P4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.77□□□□□ -2.13
RHBDD3Q9Y3P4 AL135786.1-201ENST00000415892 214 ntBASIC1.77□□□□□ -2.13
RHBDD3Q9Y3P4 VPS26BP1-201ENST00000417155 755 ntBASIC1.77□□□□□ -2.13
RHBDD3Q9Y3P4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms