Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 MIR3145-201ENST00000580727 82 ntBASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 MIR4744-201ENST00000581563 82 ntBASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 MIR4444-1-201ENST00000581696 74 ntBASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 MIR4444-2-201ENST00000584390 74 ntBASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 AP001340.1-201ENST00000624405 217 ntBASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 AL031595.2-201ENST00000624215 19071 ntBASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HPS5Q9UPZ3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HPS5Q9UPZ3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 MIR208A-201ENST00000362287 71 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 RNA5SP509-201ENST00000364577 119 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 RNU6-281P-201ENST00000384212 103 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 RNU6-1145P-201ENST00000384246 107 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 SNORA70C-201ENST00000384538 135 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 MIR10B-201ENST00000385011 110 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 MIR329-1-201ENST00000385028 80 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 RN7SKP284-201ENST00000411002 343 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 GMPSP1-201ENST00000514075 579 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 MIR2116-201ENST00000517221 80 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 AC090877.1-201ENST00000561418 344 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 MIR3158-1-201ENST00000583596 81 ntBASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HPS5Q9UPZ3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 AC009541.1-201ENST00000438279 2662 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 RNU6-460P-201ENST00000391158 108 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 MTCO1P44-201ENST00000441935 243 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 AL358232.1-201ENST00000448030 501 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 AC092991.1-201ENST00000477176 376 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 RN7SKP164-201ENST00000516138 266 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 RNU6-966P-201ENST00000516479 104 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 RNA5SP143-201ENST00000516936 115 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 AP001781.1-201ENST00000530977 207 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 CYCSP40-201ENST00000575927 294 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 MIR5695-201ENST00000579717 85 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 AC024220.1-201ENST00000603675 484 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 U7.2-201ENST00000607576 63 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 SCARNA15-201ENST00000607520 4325 ntBASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS5Q9UPZ3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 RNU6-103P-201ENST00000363686 107 ntBASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 MIR10A-201ENST00000385043 110 ntBASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 GNG5P5-201ENST00000420444 220 ntBASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 AL627311.1-201ENST00000431514 115 ntBASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 BX276092.4-201ENST00000452056 248 ntBASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 BTF3L4P4-201ENST00000506381 449 ntBASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 AC010265.1-201ENST00000513509 211 ntBASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 MIR3138-201ENST00000585238 82 ntBASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.69□□□□□ -1.5
HPS5Q9UPZ3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.68□□□□□ -1.5
HPS5Q9UPZ3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HPS5Q9UPZ3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.68□□□□□ -1.5
HPS5Q9UPZ3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS5Q9UPZ3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS5Q9UPZ3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.68□□□□□ -1.5
HPS5Q9UPZ3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS5Q9UPZ3 RN7SKP280-201ENST00000364196 304 ntBASIC5.68□□□□□ -1.5
HPS5Q9UPZ3 RNU6-1286P-201ENST00000383871 107 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms