Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 AL161912.2-201ENST00000565707 3007 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 RNU6-1040P-201ENST00000383974 107 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 RN7SKP53-201ENST00000411337 315 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 RPS15AP10-201ENST00000432472 382 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 RNU7-187P-201ENST00000458985 68 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 AL163540.1-201ENST00000485382 386 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 RPL29P14-201ENST00000495837 428 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 Y_RNA.670-201ENST00000516255 105 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 Y_RNA.711-201ENST00000516993 102 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 CASP1P1-201ENST00000526345 212 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 ELOCP31-201ENST00000540463 467 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 AC008121.1-201ENST00000603244 268 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 AL110115.1-201ENST00000614396 364 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 CUL1P1-201ENST00000509510 2425 ntBASIC4.55□□□□□ -1.68
DDX41Q9UJV9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 FTLP6-201ENST00000355274 422 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 Y_RNA.2-201ENST00000362330 96 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 Y_RNA.151-201ENST00000363566 112 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 SNORA62.3-201ENST00000365110 153 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 RNU6-217P-201ENST00000384164 104 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AL030996.1-201ENST00000411430 235 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 YPEL5P1-201ENST00000419731 367 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 USMG5P1-201ENST00000425964 177 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 USP9YP30-201ENST00000430729 455 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AL445584.1-201ENST00000431451 330 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 RPL23AP50-201ENST00000434149 455 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AL031274.1-201ENST00000450334 232 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 RPL31P61-201ENST00000496160 376 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 SMURF2P1-201ENST00000514992 481 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AC109479.2-201ENST00000517842 174 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 RNU6-988P-201ENST00000519081 107 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AC091516.1-201ENST00000549191 703 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AC123912.5-201ENST00000605470 343 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AC011890.2-201ENST00000613393 294 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 MIR7702-201ENST00000621931 59 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AC039056.2-201ENST00000622261 511 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 Z69720.2-201ENST00000624755 279 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 AC244205.2-202ENST00000635781 342 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 TNPO1P3-201ENST00000436471 2662 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
DDX41Q9UJV9 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.54□□□□□ -1.68
DDX41Q9UJV9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
DDX41Q9UJV9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX41Q9UJV9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX41Q9UJV9 RNU6-166P-201ENST00000384371 107 ntBASIC4.53□□□□□ -1.68
DDX41Q9UJV9 HMGN2P8-201ENST00000391458 268 ntBASIC4.53□□□□□ -1.68
DDX41Q9UJV9 AC093151.1-201ENST00000427711 313 ntBASIC4.53□□□□□ -1.68
DDX41Q9UJV9 DAP3P1-201ENST00000441522 278 ntBASIC4.53□□□□□ -1.68
DDX41Q9UJV9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.53□□□□□ -1.68
DDX41Q9UJV9 AC008571.1-201ENST00000467232 300 ntBASIC4.53□□□□□ -1.68
DDX41Q9UJV9 RPL7P42-201ENST00000481005 679 ntBASIC4.53□□□□□ -1.68
DDX41Q9UJV9 RNU6-1045P-201ENST00000516321 107 ntBASIC4.53□□□□□ -1.68
DDX41Q9UJV9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.53□□□□□ -1.68
DDX41Q9UJV9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.53□□□□□ -1.68
DDX41Q9UJV9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.53□□□□□ -1.68
DDX41Q9UJV9 AC011494.1-201ENST00000596454 237 ntBASIC4.53□□□□□ -1.68
DDX41Q9UJV9 uc_338.22-201ENST00000622722 187 ntBASIC4.53□□□□□ -1.68
DDX41Q9UJV9 AC092608.2-201ENST00000624427 218 ntBASIC4.53□□□□□ -1.68
DDX41Q9UJV9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
DDX41Q9UJV9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX41Q9UJV9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX41Q9UJV9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.53□□□□□ -1.69
DDX41Q9UJV9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 AF117829.1-206ENST00000621883 3802 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 Y_RNA.132-201ENST00000363421 102 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 SNORD35B-201ENST00000363660 87 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms