Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-1207P-201ENST00000384343 107 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 RNU6-952P-201ENST00000391164 108 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AL590084.2-201ENST00000401481 382 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 FGF7P8-201ENST00000402994 292 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC068533.2-201ENST00000411872 306 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 HMGN1P14-201ENST00000412459 517 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AL441985.1-201ENST00000457727 251 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC110760.3-202ENST00000515177 371 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 MTCYBP23-201ENST00000558717 1102 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC009712.1-201ENST00000564938 316 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AL138478.1-201ENST00000612252 832 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 MIR7111-201ENST00000619751 72 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC091304.6-201ENST00000619761 202 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC88CQ9P219 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC88CQ9P219 SNORA16B-201ENST00000364674 135 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 RNU6-114P-201ENST00000384704 105 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 RPL23AP29-201ENST00000397284 453 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 MIR1302-8-201ENST00000408342 128 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 RPS20P15-201ENST00000412792 311 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 MTCYBP38-201ENST00000417160 1123 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 SNRPEP9-201ENST00000436794 238 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 FABP5P14-201ENST00000437273 393 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 MTND1P31-201ENST00000449206 961 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.29□□□□□ -2.2
CCDC88CQ9P219 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC88CQ9P219 AC034244.1-201ENST00000507687 207 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC88CQ9P219 MIR892C-201ENST00000516410 77 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.29□□□□□ -2.2
CCDC88CQ9P219 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC88CQ9P219 AC023813.2-201ENST00000564321 469 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 MTND4LP25-201ENST00000570218 163 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC88CQ9P219 AC013553.2-201ENST00000604244 589 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 MIR5739-201ENST00000619803 80 ntBASIC1.29□□□□□ -2.2
CCDC88CQ9P219 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.29□□□□□ -2.2
CCDC88CQ9P219 SNORA25.9-201ENST00000365087 128 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 RNU6-637P-201ENST00000384050 107 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 RNU1-57P-201ENST00000384491 166 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 RNU6-19P-201ENST00000384718 107 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 SNORA40.19-201ENST00000390846 128 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 RNU2-33P-201ENST00000410344 192 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 HMGN2P18-201ENST00000450680 270 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC055731.1-201ENST00000474387 401 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 RPL36AP48-201ENST00000485521 314 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 RPL22P13-201ENST00000493291 347 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 TMEM251P1-201ENST00000503717 318 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 LTV1P1-201ENST00000510683 1237 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 RNU6-467P-201ENST00000517027 110 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC022861.1-201ENST00000522981 663 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AP000403.1-201ENST00000603349 851 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC068276.1-201ENST00000605793 379 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AL158163.2-201ENST00000619110 700 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 MIR3199-2-201ENST00000636243 86 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 MIR513A1-201ENST00000385138 129 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 MIR147B-201ENST00000390185 80 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AL033519.2-201ENST00000403958 392 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AL161449.1-201ENST00000414531 1199 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 VN1R36P-201ENST00000414936 291 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC083875.1-201ENST00000419509 405 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AL121601.2-201ENST00000438019 707 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC016691.1-201ENST00000441321 413 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 PAXBP1P1-201ENST00000449315 447 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 ZNF886P-201ENST00000450781 723 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 MEMO1P3-201ENST00000459811 302 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC023790.1-201ENST00000482174 347 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms