Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
SSU72Q9NP77 AC006064.5-201ENST00000541782 248 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 AC023824.2-201ENST00000566185 400 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.32□□□□□ -1.72
SSU72Q9NP77 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.32□□□□□ -1.72
SSU72Q9NP77 MIR1269B-201ENST00000580405 75 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 MIR3667-201ENST00000581025 74 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 SNORD84-203ENST00000584275 78 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 AC010928.2-201ENST00000588017 287 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 RPL23AP78-201ENST00000599928 470 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSU72Q9NP77 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSU72Q9NP77 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SSU72Q9NP77 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.32□□□□□ -1.72
SSU72Q9NP77 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSU72Q9NP77 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSU72Q9NP77 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSU72Q9NP77 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SSU72Q9NP77 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSU72Q9NP77 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSU72Q9NP77 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
SSU72Q9NP77 Y_RNA.464-201ENST00000384282 110 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 RNU6-937P-201ENST00000384325 106 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 MIR659-201ENST00000384963 97 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 SNORA3C-201ENST00000408792 125 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 RPL17P36-201ENST00000420302 549 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 CYP4F29P-201ENST00000420685 446 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSU72Q9NP77 Y_RNA.644-201ENST00000459006 113 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 snoU109.2-201ENST00000459316 135 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 AC010326.1-201ENST00000462726 602 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.31□□□□□ -1.72
SSU72Q9NP77 RN7SL808P-201ENST00000496066 299 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 RNU7-175P-201ENST00000515915 61 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 RNU6-377P-201ENST00000515965 102 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 Y_RNA.674-201ENST00000516362 113 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 RNA5SP290-201ENST00000517133 127 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 AC091144.1-201ENST00000519573 138 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 AC107016.1-201ENST00000550463 337 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.31□□□□□ -1.72
SSU72Q9NP77 AC079587.1-201ENST00000603846 277 ntBASIC4.31□□□□□ -1.72
SSU72Q9NP77 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSU72Q9NP77 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.31□□□□□ -1.72
SSU72Q9NP77 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.31□□□□□ -1.72
SSU72Q9NP77 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSU72Q9NP77 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSU72Q9NP77 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SSU72Q9NP77 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSU72Q9NP77 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.3□□□□□ -1.72
SSU72Q9NP77 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.3□□□□□ -1.72
SSU72Q9NP77 Y_RNA.76-201ENST00000362931 109 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 RNU6-662P-201ENST00000384253 104 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 AC017079.2-201ENST00000416102 485 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.3□□□□□ -1.72
SSU72Q9NP77 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.3□□□□□ -1.72
SSU72Q9NP77 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.3□□□□□ -1.72
SSU72Q9NP77 RN7SL515P-201ENST00000463999 297 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 AC005532.2-201ENST00000467154 373 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 RN7SL727P-201ENST00000482164 296 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 NIP7P2-201ENST00000485801 544 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.3□□□□□ -1.72
SSU72Q9NP77 RNU6-572P-201ENST00000516724 80 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 RNU6-1212P-201ENST00000517023 104 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.3□□□□□ -1.72
SSU72Q9NP77 AC007225.2-201ENST00000562529 256 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.3□□□□□ -1.72
SSU72Q9NP77 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.3□□□□□ -1.72
SSU72Q9NP77 AC011476.5-201ENST00000615594 130 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.3□□□□□ -1.72
SSU72Q9NP77 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SSU72Q9NP77 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSU72Q9NP77 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSU72Q9NP77 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSU72Q9NP77 AC004925.1-201ENST00000624256 2706 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSU72Q9NP77 AL590240.1-201ENST00000334118 313 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 RNU6-545P-201ENST00000362681 104 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 RNU6-1301P-201ENST00000362724 104 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 SNORD113-8-201ENST00000363497 74 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 RNA5SP397-201ENST00000391323 118 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 Y_RNA.602-201ENST00000410535 92 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 COX6B1P1-201ENST00000415962 213 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 AC007919.1-201ENST00000429380 217 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 AC011742.1-201ENST00000431448 434 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 snoU13.20-201ENST00000459180 104 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 TOMM22P6-201ENST00000465035 409 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 AC010285.1-201ENST00000470580 392 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 AC107393.1-201ENST00000512403 346 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 Y_RNA.706-201ENST00000516933 99 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 MIR2355-201ENST00000517199 87 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 CASP1P1-201ENST00000526345 212 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 MRPS36P4-201ENST00000534436 298 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 MIR3133-201ENST00000583157 78 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms