Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MIR6075-201ENST00000620782 95 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 FP236240.3-201ENST00000623061 327 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AC008568.2-201ENST00000623862 2313 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 RNU6-600P-201ENST00000362524 99 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.33-201ENST00000362591 102 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.401-201ENST00000383965 117 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.428-201ENST00000384078 102 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 RNU6-842P-201ENST00000384269 107 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 RNU6-1179P-201ENST00000384667 107 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 MIR517A-201ENST00000385001 87 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 SNORD73A-201ENST00000386062 65 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 RN7SKP156-201ENST00000410308 342 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 RNU6-607P-201ENST00000411283 108 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 CYCSP33-201ENST00000414485 327 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AC243428.1-201ENST00000421099 264 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AC007919.1-201ENST00000429380 217 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AC011742.1-201ENST00000431448 434 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AC083863.1-201ENST00000438811 231 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AL133547.1-201ENST00000448546 220 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 RPL31P61-201ENST00000496160 376 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 RNA5SP290-201ENST00000517133 127 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 LRRC37A5P-203ENST00000580181 585 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AC020914.4-201ENST00000597690 277 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 7SK.7-201ENST00000603504 247 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AC024220.1-201ENST00000603675 484 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 SNORD39.4-201ENST00000620099 78 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 AC039056.2-201ENST00000622261 511 ntBASIC3.7□□□□□ -1.82
NDC1Q9BTX1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.7□□□□□ -1.82
NDC1Q9BTX1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AP001486.2-201ENST00000561652 5113 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 RNU6-741P-201ENST00000383889 107 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.452-201ENST00000384202 108 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 RNU1-89P-201ENST00000384592 164 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 RNU2-3P-201ENST00000410144 191 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AL353621.1-201ENST00000418219 243 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AL158156.1-201ENST00000422509 473 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 VDAC1P3-201ENST00000434069 851 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 RPL23AP50-201ENST00000434149 455 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 FTH1P25-201ENST00000447665 469 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AC128713.1-201ENST00000471495 306 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AC015911.1-201ENST00000495111 156 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 VWA8P1-201ENST00000510889 176 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 RNA5SP164-201ENST00000516533 110 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 SNORD116.3-201ENST00000517176 78 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AC004817.2-201ENST00000561794 651 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AC008739.3-201ENST00000603262 127 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 HMGB1P50-201ENST00000605814 607 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 Z69720.2-201ENST00000624755 279 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 AC007390.2-201ENST00000606229 3803 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 USP8P1-201ENST00000494673 3183 ntBASIC3.69□□□□□ -1.82
NDC1Q9BTX1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.69□□□□□ -1.82
NDC1Q9BTX1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 SNORA31-201ENST00000362607 130 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.47-201ENST00000362697 108 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.149-201ENST00000363558 117 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms