Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 HMGN2P3-201ENST00000433603 273 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 HMGN2P5-201ENST00000436882 273 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 EEF1A1P39-201ENST00000440791 250 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 MTCO1P53-201ENST00000441633 699 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 FABP5P13-201ENST00000452144 328 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC112771.1-201ENST00000463581 102 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 RPL23AP42-201ENST00000471152 471 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC117503.1-201ENST00000472241 394 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC104982.1-201ENST00000478775 574 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 RPL21P99-201ENST00000480369 423 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC140059.1-201ENST00000489238 361 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC055855.1-201ENST00000489563 579 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC096571.1-202ENST00000506634 735 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 ACA59.2-201ENST00000517061 156 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC079598.5-201ENST00000547460 117 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC012435.1-202ENST00000568772 240 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 MIR4293-201ENST00000584305 78 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 MIR5002-201ENST00000584713 97 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC104763.2-201ENST00000604179 382 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC090970.3-201ENST00000612566 866 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC005296.1-201ENST00000616145 209 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 MIR6134-201ENST00000617606 109 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC012150.2-201ENST00000621300 544 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 CDC27P3-201ENST00000635418 1910 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC138393.1-203ENST00000327086 343 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 RNU6-188P-201ENST00000364207 107 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AL512604.1-201ENST00000404812 257 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 MIR1305-201ENST00000408300 86 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 RNU2-2P-201ENST00000410396 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AL139156.1-201ENST00000412785 841 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 RSU1P2-202ENST00000437884 485 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 DNAJC19P4-201ENST00000440115 345 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 FDX1P2-201ENST00000450769 375 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC108059.3-201ENST00000456388 214 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 MTCO1P42-201ENST00000457379 726 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC011005.2-201ENST00000487324 359 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 RPL39P36-201ENST00000490784 156 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 RNA5SP137-201ENST00000516833 135 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC107953.1-201ENST00000522216 297 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 MTND1P36-201ENST00000522384 936 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AP006587.4-201ENST00000526053 529 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 FAM92A1P1-201ENST00000528023 890 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 DEFB108A-201ENST00000530110 222 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AP000907.2-201ENST00000530827 353 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC090897.2-201ENST00000581715 130 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC009314.1-201ENST00000603871 304 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.15-201ENST00000611544 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.16-201ENST00000613119 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.12-201ENST00000613778 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.20-201ENST00000613956 192 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.9-201ENST00000615427 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.11-201ENST00000616345 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.2-201ENST00000616535 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.3-201ENST00000617785 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.19-201ENST00000618602 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 RNU2-1-201ENST00000618664 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.6-201ENST00000619225 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.5-201ENST00000619465 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC013470.4-201ENST00000619978 986 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 U2.10-201ENST00000620268 191 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC099654.9-201ENST00000637055 678 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC099654.8-201ENST00000637757 681 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC099786.3-201ENST00000565735 1410 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 ZNF702P-202ENST00000434269 1966 ntBASIC1.37□□□□□ -2.19
UPK3BQ9BT76 AC103710.2-202ENST00000641454 2853 ntBASIC1.36□□□□□ -2.19
UPK3BQ9BT76 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.36□□□□□ -2.19
UPK3BQ9BT76 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
UPK3BQ9BT76 RNU6-701P-201ENST00000384059 107 ntBASIC1.36□□□□□ -2.19
UPK3BQ9BT76 OR51A5P-201ENST00000415429 942 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms