Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.24□□□□□ -2.37
SPENQ96T58 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
SPENQ96T58 MIR1207-201ENST00000408249 87 ntBASIC0.24□□□□□ -2.37
SPENQ96T58 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.24□□□□□ -2.37
SPENQ96T58 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.24□□□□□ -2.37
SPENQ96T58 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.24□□□□□ -2.37
SPENQ96T58 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.24□□□□□ -2.37
SPENQ96T58 RNU6-322P-201ENST00000516010 103 ntBASIC0.24□□□□□ -2.37
SPENQ96T58 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.24□□□□□ -2.37
SPENQ96T58 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.24□□□□□ -2.37
SPENQ96T58 MIR548AX-201ENST00000580117 73 ntBASIC0.24□□□□□ -2.37
SPENQ96T58 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.24□□□□□ -2.37
SPENQ96T58 SNORA68.1-201ENST00000364537 132 ntBASIC0.24□□□□□ -2.37
SPENQ96T58 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.24□□□□□ -2.37
SPENQ96T58 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.24□□□□□ -2.37
SPENQ96T58 VN1R81P-201ENST00000602085 372 ntBASIC0.24□□□□□ -2.37
SPENQ96T58 AL161423.1-201ENST00000613700 262 ntBASIC0.24□□□□□ -2.37
SPENQ96T58 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
SPENQ96T58 RNU6-968P-201ENST00000384076 107 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 MTCYBP24-201ENST00000420387 1106 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.23□□□□□ -2.37
SPENQ96T58 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.23□□□□□ -2.37
SPENQ96T58 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.23□□□□□ -2.37
SPENQ96T58 AL589880.1-201ENST00000448271 287 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 SNRPGP6-201ENST00000451124 220 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 OR52A4P-202ENST00000481634 799 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 NCOR1P1-202ENST00000486162 291 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.23□□□□□ -2.37
SPENQ96T58 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.23□□□□□ -2.37
SPENQ96T58 MTND4P16-201ENST00000466108 1367 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 RNY4P24-201ENST00000362735 96 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 Y_RNA.476-201ENST00000384347 108 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 RNU6-1222P-201ENST00000384615 107 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 MIR214-201ENST00000385214 110 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 PIGFP2-201ENST00000421400 651 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 RPL7P29-201ENST00000437151 728 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 DYNLT3P2-201ENST00000442517 295 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 RNU5F-8P-201ENST00000515941 111 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 BNIP3P16-201ENST00000589779 534 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.23□□□□□ -2.37
SPENQ96T58 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
SPENQ96T58 RNA5SP212-201ENST00000391223 107 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.23□□□□□ -2.37
SPENQ96T58 AC114737.2-201ENST00000421583 173 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 AL035410.1-201ENST00000427409 427 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 CR769776.1-201ENST00000441254 787 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 MIR4661-201ENST00000582720 75 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 AP001180.6-201ENST00000584918 159 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 FRG1HP-204ENST00000617940 757 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 MIR4496-201ENST00000635896 61 ntBASIC0.23□□□□□ -2.37
SPENQ96T58 RNA5SP240-201ENST00000365355 128 ntBASIC0.22□□□□□ -2.37
SPENQ96T58 RPS3AP36-201ENST00000398190 775 ntBASIC0.22□□□□□ -2.37
SPENQ96T58 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.22□□□□□ -2.37
SPENQ96T58 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.22□□□□□ -2.37
SPENQ96T58 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.22□□□□□ -2.37
SPENQ96T58 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.22□□□□□ -2.37
SPENQ96T58 AC108120.2-201ENST00000512973 294 ntBASIC0.22□□□□□ -2.37
SPENQ96T58 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.22□□□□□ -2.37
SPENQ96T58 SNORD118-201ENST00000363593 134 ntBASIC0.22□□□□□ -2.37
SPENQ96T58 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
SPENQ96T58 AC096649.2-201ENST00000416186 393 ntBASIC0.22□□□□□ -2.37
SPENQ96T58 MTND1P16-201ENST00000465177 898 ntBASIC0.22□□□□□ -2.37
SPENQ96T58 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
SPENQ96T58 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.22□□□□□ -2.37
SPENQ96T58 CIR1P1-201ENST00000524055 1133 ntBASIC0.22□□□□□ -2.37
SPENQ96T58 AP003400.5-201ENST00000624827 617 ntBASIC0.22□□□□□ -2.37
SPENQ96T58 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.22□□□□□ -2.37
SPENQ96T58 SNORA8-201ENST00000384574 139 ntBASIC0.22□□□□□ -2.37
SPENQ96T58 EDDM3CP-201ENST00000415977 425 ntBASIC0.22□□□□□ -2.37
SPENQ96T58 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.22□□□□□ -2.37
SPENQ96T58 RPEP5-201ENST00000441137 268 ntBASIC0.22□□□□□ -2.37
SPENQ96T58 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.22□□□□□ -2.37
SPENQ96T58 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.22□□□□□ -2.37
SPENQ96T58 AC133963.2-201ENST00000513686 578 ntBASIC0.21□□□□□ -2.38
SPENQ96T58 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.21□□□□□ -2.38
SPENQ96T58 AC018659.1-201ENST00000551083 169 ntBASIC0.21□□□□□ -2.38
SPENQ96T58 AC106800.4-201ENST00000614905 153 ntBASIC0.21□□□□□ -2.38
SPENQ96T58 MIR7515-201ENST00000637837 67 ntBASIC0.21□□□□□ -2.38
SPENQ96T58 PIGPP2-201ENST00000411569 458 ntBASIC0.21□□□□□ -2.38
SPENQ96T58 PSMC1P5-201ENST00000512850 177 ntBASIC0.21□□□□□ -2.38
SPENQ96T58 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.21□□□□□ -2.38
SPENQ96T58 MIR4645-201ENST00000583158 77 ntBASIC0.21□□□□□ -2.38
SPENQ96T58 AC016925.2-201ENST00000605108 242 ntBASIC0.21□□□□□ -2.38
SPENQ96T58 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.21□□□□□ -2.38
SPENQ96T58 TPTE2P4-201ENST00000258589 1605 ntBASIC0.21□□□□□ -2.38
SPENQ96T58 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.2□□□□□ -2.38
SPENQ96T58 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.2□□□□□ -2.38
SPENQ96T58 RNA5SP57-201ENST00000459463 123 ntBASIC0.2□□□□□ -2.38
SPENQ96T58 AC134050.1-201ENST00000495088 933 ntBASIC0.2□□□□□ -2.38
SPENQ96T58 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.2□□□□□ -2.38
SPENQ96T58 AC005668.1-201ENST00000571142 476 ntBASIC0.2□□□□□ -2.38
SPENQ96T58 AC018618.2-201ENST00000604770 446 ntBASIC0.2□□□□□ -2.38
SPENQ96T58 AL365204.3-201ENST00000612448 685 ntBASIC0.2□□□□□ -2.38
SPENQ96T58 AC016716.1-201ENST00000265882 708 ntBASIC0.2□□□□□ -2.38
SPENQ96T58 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.2□□□□□ -2.38
SPENQ96T58 RPL37P10-201ENST00000412884 288 ntBASIC0.2□□□□□ -2.38
SPENQ96T58 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.2□□□□□ -2.38
SPENQ96T58 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.2□□□□□ -2.38
SPENQ96T58 AC021146.2-201ENST00000504736 556 ntBASIC0.2□□□□□ -2.38
SPENQ96T58 AC010186.2-204ENST00000537668 439 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms