Protein–RNA interactions for Protein: Q96Q05

TRAPPC9, Trafficking protein particle complex subunit 9, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9Q96Q05 RPS15AP27-201ENST00000449183 343 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 RPL26P9-201ENST00000457466 433 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 RPL21P10-201ENST00000463521 490 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 CENPBD1P1-201ENST00000464061 469 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 RPL21P13-201ENST00000488305 481 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 RPL38P4-201ENST00000502376 214 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 AC091885.1-201ENST00000506658 268 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 AC008716.1-201ENST00000511084 513 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 AC007536.1-201ENST00000533382 349 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 AC092325.1-201ENST00000566449 554 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 AC002553.4-201ENST00000616896 331 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 U6.42-201ENST00000618440 107 ntBASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRAPPC9Q96Q05 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
TRAPPC9Q96Q05 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 MIR412-201ENST00000362142 91 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 RNU1-33P-201ENST00000364249 162 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 RNU4-20P-201ENST00000365601 151 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 RNU6-38P-201ENST00000384085 107 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 RNU6-434P-201ENST00000384376 107 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 SNORA40C-201ENST00000391285 128 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 NDUFB4P4-201ENST00000404822 243 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 OR9R1P-201ENST00000412200 877 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AL353729.1-201ENST00000425044 720 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 CALM1P1-201ENST00000442082 433 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AL357552.1-201ENST00000445254 415 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 MTND3P16-201ENST00000452205 344 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AC092798.1-201ENST00000458542 409 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 RNU6-333P-201ENST00000459117 107 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 RNU7-23P-201ENST00000459465 62 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AC008155.2-201ENST00000464337 397 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 MTCO3P38-201ENST00000468910 766 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 RPS29P25-201ENST00000481709 171 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 RPS29P20-201ENST00000489592 171 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AC026801.1-201ENST00000497178 464 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AL117351.2-201ENST00000513571 157 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 RNU6-572P-201ENST00000516724 80 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 SNORA31.19-201ENST00000517079 126 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 IGKV2-26-201ENST00000518305 343 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AC106782.4-201ENST00000568264 210 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AP001094.1-201ENST00000579805 193 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 MIR5583-1-201ENST00000580941 59 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 NRBF2P5-201ENST00000603087 788 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 MTND4LP5-201ENST00000605152 292 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AC004832.5-201ENST00000608677 401 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AC024614.3-201ENST00000637860 256 ntBASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.33□□□□□ -1.88
TRAPPC9Q96Q05 MAPK10-322ENST00000641485 4530 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 GABRG2-229ENST00000641017 3628 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 RNU6-1179P-201ENST00000384667 107 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 MIR514A2-201ENST00000385131 88 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 MIR514A3-201ENST00000385132 88 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 SNORA16.2-201ENST00000390991 127 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 MIR887-201ENST00000401258 79 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AL592114.1-201ENST00000403842 483 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AL031121.1-201ENST00000406553 254 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 RN7SKP111-201ENST00000410349 271 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 RN7SKP58-201ENST00000411010 305 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 BX323014.1-201ENST00000412876 237 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 HSPE1P1-201ENST00000421494 318 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 HMGB1P9-201ENST00000429856 646 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 MRPS10P2-201ENST00000431226 381 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 RPS27AP10-201ENST00000496103 208 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AC026333.2-201ENST00000542164 106 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms