Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU6-282P-201ENST00000365357 103 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 RNA5SP354-201ENST00000391247 136 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AL359511.1-201ENST00000402970 211 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AL663109.1-201ENST00000411498 844 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 RPS12P24-201ENST00000412619 387 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC114491.1-201ENST00000416095 246 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 RPL7P37-201ENST00000425095 738 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 ELOCP14-201ENST00000428070 331 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC133104.1-201ENST00000429100 218 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 RPL36AP53-201ENST00000432891 316 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 ELOCP7-201ENST00000439968 331 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC008571.1-201ENST00000467232 300 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC126182.1-201ENST00000478134 357 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC117522.1-201ENST00000509821 380 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 MTCO3P7-201ENST00000510008 774 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 MTND3P5-201ENST00000512798 333 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 RNA5SP165-201ENST00000517142 115 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC090572.1-201ENST00000519251 160 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 OR5B19P-201ENST00000531766 928 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC091544.4-201ENST00000555268 342 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AL391840.1-201ENST00000571144 367 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC098848.2-201ENST00000588023 330 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 Z84480.1-201ENST00000605131 311 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AL158032.1-201ENST00000605401 106 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 FTX_3.1-201ENST00000610451 147 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC005332.10-201ENST00000612725 619 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC025034.2-201ENST00000623264 286 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 MTND5P42-201ENST00000637720 498 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 MTND5P29-201ENST00000458676 1807 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AL137003.2-201ENST00000606924 2538 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 AC138915.1-201ENST00000565427 1685 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 RNU6-884P-201ENST00000363889 107 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 RNU4-24P-201ENST00000364565 139 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 Y_RNA.318-201ENST00000365131 97 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 OR5H15-201ENST00000383696 930 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 RNU6-456P-201ENST00000384493 107 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 FO393413.1-201ENST00000402892 195 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 RPS4XP7-201ENST00000406274 780 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 PIGFP2-201ENST00000421400 651 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 GPR143P-201ENST00000434155 205 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 SNRPEP9-201ENST00000436794 238 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 C1DP4-201ENST00000455429 424 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 RPL23AP45-201ENST00000476406 468 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 AC108078.2-201ENST00000510750 236 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 Y_RNA.689-201ENST00000516589 107 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 RNU6-410P-201ENST00000517006 107 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 MTCO2P4-201ENST00000517968 247 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 AP003392.2-201ENST00000527269 208 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 MTCYBP33-201ENST00000575007 1130 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 MIR5092-201ENST00000583139 88 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 AC087683.1-201ENST00000591187 441 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 AC068790.2-201ENST00000602601 557 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 MTND4LP5-201ENST00000605152 292 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 AC022893.3-201ENST00000607665 437 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 AC013412.1-201ENST00000610687 192 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 AC099842.1-201ENST00000619919 596 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.75□□□□□ -1.97
CCDC60Q8IWA6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 RNU6-181P-201ENST00000363225 107 ntBASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 RNU4-75P-201ENST00000364621 146 ntBASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 DLGAP5P1-201ENST00000430307 464 ntBASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 USP9YP14-201ENST00000430663 563 ntBASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 AC009296.1-201ENST00000443146 155 ntBASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 AC133134.1-201ENST00000466800 359 ntBASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 RPL39P36-201ENST00000490784 156 ntBASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 AC008413.1-201ENST00000511864 177 ntBASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 RNU6-143P-201ENST00000516942 93 ntBASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 RNU6-445P-201ENST00000516949 107 ntBASIC2.74□□□□□ -1.97
CCDC60Q8IWA6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms