Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MYL8P-204ENST00000431574 518 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 PSPHP1-201ENST00000450062 261 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 AC027673.1-201ENST00000456245 405 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 AL590639.1-201ENST00000456484 337 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 RNU7-63P-201ENST00000459054 62 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 GMFBP1-201ENST00000467831 427 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 TRBV1-201ENST00000476502 284 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 RNU6-720P-201ENST00000516363 108 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 RNU6-1183P-201ENST00000517054 60 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 SNORA31.19-201ENST00000517079 126 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.86□□□□□ -1.95
LDB1Q86U70 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB1Q86U70 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.86□□□□□ -1.95
LDB1Q86U70 MIR4703-201ENST00000577728 79 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 AC005498.1-201ENST00000592125 465 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 DEFB131E-202ENST00000602581 683 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 AC099654.12-201ENST00000639868 649 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.86□□□□□ -1.95
LDB1Q86U70 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LDB1Q86U70 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LDB1Q86U70 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LDB1Q86U70 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LDB1Q86U70 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
LDB1Q86U70 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LDB1Q86U70 AC108206.1-201ENST00000570186 4159 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LDB1Q86U70 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LDB1Q86U70 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LDB1Q86U70 OR4G2P-201ENST00000328113 903 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 SNORA9.2-201ENST00000365361 133 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
LDB1Q86U70 MTCO3P40-201ENST00000392516 676 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LDB1Q86U70 AL139039.1-201ENST00000401900 692 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 AL356057.2-201ENST00000403318 432 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 RNU4-46P-201ENST00000410818 138 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 EEF1A1P40-201ENST00000412883 573 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 MTCO3P30-201ENST00000426425 670 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 AC007560.1-201ENST00000426912 237 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 AC009414.1-201ENST00000427200 443 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 TIMM9P3-201ENST00000428659 274 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 RPL21P2-201ENST00000440049 481 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 AL078601.1-201ENST00000444542 271 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 WASF1P1-201ENST00000447560 1131 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.85□□□□□ -1.95
LDB1Q86U70 AC022493.1-201ENST00000492984 337 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.85□□□□□ -1.95
LDB1Q86U70 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.85□□□□□ -1.95
LDB1Q86U70 AP001893.2-201ENST00000526949 202 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 AC022880.1-201ENST00000534017 973 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.85□□□□□ -1.95
LDB1Q86U70 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.85□□□□□ -1.95
LDB1Q86U70 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.85□□□□□ -1.95
LDB1Q86U70 MIR5692A1-201ENST00000580523 69 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.85□□□□□ -1.95
LDB1Q86U70 U6.42-201ENST00000618440 107 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 AC139792.3-201ENST00000623525 224 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 MIR3199-2-201ENST00000636243 86 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.85□□□□□ -1.95
LDB1Q86U70 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LDB1Q86U70 AC000403.1-201ENST00000613696 3585 ntBASIC2.85□□□□□ -1.95
LDB1Q86U70 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.85□□□□□ -1.95
LDB1Q86U70 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.84□□□□□ -1.95
LDB1Q86U70 AC092435.3-201ENST00000565538 3654 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LDB1Q86U70 HSPA8P4-201ENST00000511877 1920 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
LDB1Q86U70 MIR412-201ENST00000362142 91 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 RNU6-371P-201ENST00000364283 108 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 RNU6-166P-201ENST00000384371 107 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 Y_RNA.481-201ENST00000384373 102 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 MIR512-1-201ENST00000384913 84 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 MIR128-1-201ENST00000384921 82 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AC068050.1-201ENST00000394891 380 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 RNU2-29P-201ENST00000410423 189 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AL592148.1-201ENST00000413568 445 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.84□□□□□ -1.95
LDB1Q86U70 AC104332.2-201ENST00000429959 156 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.84□□□□□ -1.95
LDB1Q86U70 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.84□□□□□ -1.95
LDB1Q86U70 HMGN2P10-201ENST00000448085 265 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.84□□□□□ -1.95
LDB1Q86U70 SRRM1P2-201ENST00000464531 1192 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AC092436.1-201ENST00000506450 503 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.84□□□□□ -1.95
LDB1Q86U70 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.84□□□□□ -1.95
LDB1Q86U70 AC022080.3-201ENST00000544433 482 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AC021739.1-201ENST00000559631 174 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 LINC00933-203ENST00000559812 219 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 EIF1P4-201ENST00000572664 335 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AC008752.3-201ENST00000588113 712 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AL451007.1-201ENST00000595491 289 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AC012119.1-201ENST00000603184 222 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AL355877.2-201ENST00000603670 358 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AC005000.2-201ENST00000605468 310 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.84□□□□□ -1.95
LDB1Q86U70 AP001330.5-201ENST00000607176 411 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AL359880.1-201ENST00000621879 266 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms