Protein–RNA interactions for Protein: Q70EK8

USP53, Inactive ubiquitin carboxyl-terminal hydrolase 53, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP53Q70EK8 GOT2P5-201ENST00000433995 546 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.05□□□□□ -1.76
USP53Q70EK8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.05□□□□□ -1.76
USP53Q70EK8 AL513043.1-201ENST00000439124 535 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 AC013470.1-201ENST00000453438 462 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 RPL9P9-202ENST00000466501 579 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 RPS26P28-201ENST00000470806 348 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.05□□□□□ -1.76
USP53Q70EK8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.05□□□□□ -1.76
USP53Q70EK8 RPL17P19-201ENST00000489069 552 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 AC015911.1-201ENST00000495111 156 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 AC022447.4-201ENST00000504053 364 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 RNU6-703P-201ENST00000516946 107 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 AC007991.1-201ENST00000522680 631 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 AC006064.5-201ENST00000541782 248 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.05□□□□□ -1.76
USP53Q70EK8 MIR3976-201ENST00000606807 139 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 MIR7154-201ENST00000620673 73 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 7SK.10-201ENST00000621414 298 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 CR392039.5-201ENST00000623201 510 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.05□□□□□ -1.76
USP53Q70EK8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.05□□□□□ -1.76
USP53Q70EK8 AC119674.1-207ENST00000641355 633 ntBASIC4.05□□□□□ -1.76
USP53Q70EK8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
USP53Q70EK8 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
USP53Q70EK8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.05□□□□□ -1.76
USP53Q70EK8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP53Q70EK8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP53Q70EK8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.04□□□□□ -1.76
USP53Q70EK8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP53Q70EK8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
USP53Q70EK8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.04□□□□□ -1.76
USP53Q70EK8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP53Q70EK8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.04□□□□□ -1.76
USP53Q70EK8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP53Q70EK8 AC007685.1-201ENST00000329806 452 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 FTLP6-201ENST00000355274 422 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 MIR208A-201ENST00000362287 71 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 Y_RNA.527-201ENST00000384573 102 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 MIR93-201ENST00000385024 80 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP53Q70EK8 AL591034.2-201ENST00000402839 359 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.04□□□□□ -1.76
USP53Q70EK8 AC092573.2-201ENST00000434546 243 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.04□□□□□ -1.76
USP53Q70EK8 RPL23AP46-201ENST00000438548 490 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AC128713.1-201ENST00000471495 306 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AC104164.2-201ENST00000496953 495 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AC025445.1-201ENST00000502728 300 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AC006499.6-201ENST00000511169 607 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 IGKV2D-19-201ENST00000523346 262 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 CASP1P1-201ENST00000526345 212 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP53Q70EK8 AC069240.1-201ENST00000548774 375 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AC022655.2-201ENST00000577280 318 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 MIR4273-201ENST00000582824 84 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AL606490.9-201ENST00000603331 271 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AC092447.9-201ENST00000603395 144 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AC025946.2-201ENST00000603398 234 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AC005014.2-201ENST00000607795 599 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AC004825.2-201ENST00000616634 455 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 AC027309.3-201ENST00000623419 351 ntBASIC4.04□□□□□ -1.76
USP53Q70EK8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP53Q70EK8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.04□□□□□ -1.76
USP53Q70EK8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP53Q70EK8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.04□□□□□ -1.76
USP53Q70EK8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP53Q70EK8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.04□□□□□ -1.76
USP53Q70EK8 Z82217.1-201ENST00000625157 8149 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 AC005592.1-201ENST00000566527 1640 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP53Q70EK8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP53Q70EK8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 SNORA71.3-201ENST00000362582 128 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP53Q70EK8 Y_RNA.605-201ENST00000410577 105 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP53Q70EK8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.03□□□□□ -1.76
USP53Q70EK8 AC087650.1-201ENST00000431445 468 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.03□□□□□ -1.76
USP53Q70EK8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.03□□□□□ -1.76
USP53Q70EK8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP53Q70EK8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.03□□□□□ -1.76
USP53Q70EK8 U8.21-201ENST00000459536 136 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 RPL21P104-201ENST00000464143 478 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 AC133134.1-201ENST00000466800 359 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 HMGN2P13-201ENST00000476476 274 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.03□□□□□ -1.76
USP53Q70EK8 RNU6-475P-201ENST00000516073 104 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 RNU4-77P-201ENST00000516692 156 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.03□□□□□ -1.76
USP53Q70EK8 IGLV3-26-201ENST00000520756 302 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 CBX3P8-201ENST00000532412 525 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.03□□□□□ -1.76
USP53Q70EK8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.03□□□□□ -1.76
USP53Q70EK8 ZNF192P1-203ENST00000565888 810 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 FTX_3.1-201ENST00000610451 147 ntBASIC4.03□□□□□ -1.76
USP53Q70EK8 AC004852.3-201ENST00000614131 326 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms