Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.61□□□□□ -2.31
UBR3Q6ZT12 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR3Q6ZT12 AC147055.4-201ENST00000504399 745 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
UBR3Q6ZT12 HAUS1P3-201ENST00000523909 662 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR3Q6ZT12 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR3Q6ZT12 FRG1HP-204ENST00000617940 757 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 Z99571.1-201ENST00000636677 394 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 Y_RNA.458-201ENST00000384240 102 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 RNU6-1222P-201ENST00000384615 107 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 PRRC2CP1-201ENST00000404428 159 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 MTATP6P31-201ENST00000406985 692 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR3Q6ZT12 RNA5SP404-201ENST00000517118 132 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.61□□□□□ -2.31
UBR3Q6ZT12 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR3Q6ZT12 Z69720.2-201ENST00000624755 279 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
UBR3Q6ZT12 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.6□□□□□ -2.31
UBR3Q6ZT12 RNU6-989P-201ENST00000362756 107 ntBASIC0.6□□□□□ -2.31
UBR3Q6ZT12 RNU6-270P-201ENST00000364131 105 ntBASIC0.6□□□□□ -2.31
UBR3Q6ZT12 RNU6-374P-201ENST00000364146 108 ntBASIC0.6□□□□□ -2.31
UBR3Q6ZT12 RNU6-185P-201ENST00000384421 107 ntBASIC0.6□□□□□ -2.31
UBR3Q6ZT12 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.6□□□□□ -2.31
UBR3Q6ZT12 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.6□□□□□ -2.31
UBR3Q6ZT12 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.6□□□□□ -2.31
UBR3Q6ZT12 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.6□□□□□ -2.31
UBR3Q6ZT12 AL021997.1-201ENST00000605757 193 ntBASIC0.6□□□□□ -2.31
UBR3Q6ZT12 AP000254.1-201ENST00000609934 520 ntBASIC0.6□□□□□ -2.31
UBR3Q6ZT12 RNU6-1035P-201ENST00000384477 107 ntBASIC0.59□□□□□ -2.31
UBR3Q6ZT12 MIR30A-201ENST00000385092 71 ntBASIC0.59□□□□□ -2.31
UBR3Q6ZT12 RNU6-821P-201ENST00000390995 107 ntBASIC0.59□□□□□ -2.31
UBR3Q6ZT12 FTH1P15-201ENST00000406984 280 ntBASIC0.59□□□□□ -2.31
UBR3Q6ZT12 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
UBR3Q6ZT12 AC013410.2-201ENST00000422627 201 ntBASIC0.59□□□□□ -2.31
UBR3Q6ZT12 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.59□□□□□ -2.31
UBR3Q6ZT12 HMGB1P35-201ENST00000503360 598 ntBASIC0.59□□□□□ -2.31
UBR3Q6ZT12 AC024595.1-201ENST00000623088 387 ntBASIC0.59□□□□□ -2.31
UBR3Q6ZT12 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
UBR3Q6ZT12 RNU6-222P-201ENST00000362438 107 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 RNU6-748P-201ENST00000384648 107 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 RNA5SP63-201ENST00000391225 112 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 RNA5SP127-201ENST00000411051 133 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 VN1R42P-201ENST00000424651 344 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.58□□□□□ -2.32
UBR3Q6ZT12 DYNLT3P2-201ENST00000442517 295 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AL589880.1-201ENST00000448271 287 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC114786.4-201ENST00000508771 728 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC114797.1-201ENST00000514003 728 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 RNA5SP137-201ENST00000516833 135 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AL391261.3-201ENST00000557194 520 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AL356432.3-201ENST00000568952 465 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC008751.2-201ENST00000597885 980 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC104763.3-201ENST00000613765 618 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AL078604.3-201ENST00000615580 211 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC008443.7-201ENST00000622195 246 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
UBR3Q6ZT12 RNU6-1155P-201ENST00000363554 107 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 RNU1-36P-201ENST00000365130 165 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 MIR515-2-201ENST00000384883 83 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 MIR515-1-201ENST00000384884 83 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC023141.4-201ENST00000412031 328 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AL035666.1-201ENST00000446195 348 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.58□□□□□ -2.32
UBR3Q6ZT12 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC025857.1-201ENST00000525252 377 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC004923.2-201ENST00000529649 369 ntBASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.58□□□□□ -2.32
UBR3Q6ZT12 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.58□□□□□ -2.32
UBR3Q6ZT12 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
UBR3Q6ZT12 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.57□□□□□ -2.32
UBR3Q6ZT12 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
UBR3Q6ZT12 AC114737.2-201ENST00000421583 173 ntBASIC0.57□□□□□ -2.32
UBR3Q6ZT12 RPL7P29-201ENST00000437151 728 ntBASIC0.57□□□□□ -2.32
UBR3Q6ZT12 BUD31P2-201ENST00000449374 300 ntBASIC0.57□□□□□ -2.32
UBR3Q6ZT12 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.57□□□□□ -2.32
UBR3Q6ZT12 AC087045.1-201ENST00000605856 382 ntBASIC0.57□□□□□ -2.32
UBR3Q6ZT12 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
UBR3Q6ZT12 MIR424-201ENST00000362227 98 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 RNA5SP240-201ENST00000365355 128 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 MIR325-201ENST00000385260 98 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 MT-TC-201ENST00000387405 66 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 RNU6-272P-201ENST00000411028 104 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.56□□□□□ -2.32
UBR3Q6ZT12 AC083875.1-201ENST00000419509 405 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 NDUFA5P10-201ENST00000432147 357 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 RPL23AP35-201ENST00000451906 501 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 RPL9P9-202ENST00000466501 579 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 AC104164.3-201ENST00000467363 1258 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.56□□□□□ -2.32
UBR3Q6ZT12 AC005668.1-201ENST00000571142 476 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 MIR3921-201ENST00000577308 85 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 AL138478.1-201ENST00000612252 832 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 AL512506.2-201ENST00000624472 458 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 SNORA63.3-201ENST00000362682 132 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 RNU6-339P-201ENST00000384310 107 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms