Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 MAPK10-373ENST00000641983 6772 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 AC093908.1-201ENST00000623125 8092 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 MARK2P15-201ENST00000432204 2186 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 Y_RNA.151-201ENST00000363566 112 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-525P-201ENST00000363685 104 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 RNA5SP387-201ENST00000364226 106 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 RNA5SP189-201ENST00000364920 115 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 Y_RNA.364-201ENST00000365532 101 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC008267.5-201ENST00000424928 265 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 RPL21P66-201ENST00000426566 466 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AL627311.1-201ENST00000431514 115 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AL133396.1-201ENST00000432048 687 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC099799.1-201ENST00000439809 192 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC009237.8-201ENST00000445492 379 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 BTF3P15-201ENST00000455606 336 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-1037P-201ENST00000459571 107 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC008571.1-201ENST00000467232 300 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 SCARNA16.2-201ENST00000516520 172 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-1046P-201ENST00000516538 107 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 SNORD116.3-201ENST00000517176 78 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 RNA5SP179-201ENST00000517284 121 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC007991.1-201ENST00000522680 631 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC025946.2-201ENST00000603398 234 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC106900.2-201ENST00000604994 317 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC091167.4-201ENST00000605079 184 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 ZNF807-201ENST00000328088 1707 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 MTND4P1-201ENST00000457501 1466 ntBASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RUFY4Q6ZNE9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 SNORA73.2-201ENST00000364946 201 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-842P-201ENST00000384269 107 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 Y_RNA.473-201ENST00000384333 102 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 RNY1P14-201ENST00000384426 108 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 SNORD73A-201ENST00000386062 65 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-174P-201ENST00000410406 106 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 AP000873.1-201ENST00000463987 400 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 AC018437.1-201ENST00000492214 406 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 AC022493.2-201ENST00000506122 481 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 Y_RNA.661-201ENST00000516003 99 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 RNA5SP384-201ENST00000516615 116 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-699P-201ENST00000517081 110 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 AL117187.1-201ENST00000555482 181 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 SUB1P3-201ENST00000564581 315 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 AC010653.1-201ENST00000571108 881 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 7SK.10-201ENST00000621414 298 ntBASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RUFY4Q6ZNE9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 AC007785.2-201ENST00000598627 1916 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 SNORA31-201ENST00000362607 130 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-384P-201ENST00000364900 104 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 Y_RNA.333-201ENST00000365274 102 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 RNU1-89P-201ENST00000384592 164 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 U8.11-201ENST00000384699 133 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 U8.12-201ENST00000384701 133 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-331P-201ENST00000384724 107 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 AL356057.3-201ENST00000402607 340 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 Y_RNA.623-201ENST00000411128 95 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 RAB9AP3-201ENST00000412737 573 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 AL592148.1-201ENST00000413568 445 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 MTCYBP10-201ENST00000424905 650 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 FTH1P25-201ENST00000447665 469 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 RAB9AP1-201ENST00000449393 573 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 U8.18-201ENST00000459285 133 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 RN7SL323P-201ENST00000494712 295 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-475P-201ENST00000516073 104 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-1137P-201ENST00000517073 99 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 YPEL5P3-201ENST00000547227 352 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms