Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 Y_RNA.194-201ENST00000363985 102 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 SNORA62.1-201ENST00000364287 154 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 SNORD115-7-201ENST00000365306 82 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 RNU6-1060P-201ENST00000384664 107 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 Y_RNA.559-201ENST00000384686 107 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 Y_RNA.576-201ENST00000384781 102 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 AL356057.2-201ENST00000403318 432 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 MTATP6P18-201ENST00000417994 673 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 NIPA2P5-201ENST00000452282 464 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 AP001486.1-201ENST00000463339 476 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 RPL31P41-201ENST00000477967 372 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 OR5BN1P-201ENST00000532955 829 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 AC007151.1-201ENST00000572774 483 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 MIR5692A1-201ENST00000580523 69 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 AC010620.2-201ENST00000600135 313 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 AC126118.1-201ENST00000607744 628 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 AC005609.4-201ENST00000625071 447 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 Y_RNA.111-201ENST00000363248 100 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 RNU6-1103P-201ENST00000384150 107 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 MIR181B1-201ENST00000385240 110 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 U3.26-201ENST00000391236 204 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 SNORA40C-201ENST00000391285 128 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AL122016.1-201ENST00000403365 367 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 OR51A5P-201ENST00000415429 942 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 SAR1AP4-201ENST00000429225 591 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 OSTCP8-201ENST00000445117 448 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AC104058.1-201ENST00000448028 297 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 TPT1P7-201ENST00000458300 517 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 RN7SL499P-201ENST00000481141 276 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 RBBP4P6-201ENST00000508098 202 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AC098591.2-201ENST00000510152 315 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 LINC00933-203ENST00000559812 219 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AC010546.1-201ENST00000569391 485 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AC008536.2-201ENST00000607284 349 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AC093783.1-201ENST00000612976 329 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 MIR6733-201ENST00000635723 61 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 AC010889.1-201ENST00000566193 2666 ntBASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.08□□□□□ -1.92
SNX30Q5VWJ9 RNU6-623P-201ENST00000363143 105 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 OR5H15-201ENST00000383696 930 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 OR6C66P-201ENST00000414917 930 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AC002486.1-201ENST00000435098 391 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 MTCO2P7-201ENST00000446518 666 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 BTF3P15-201ENST00000455606 336 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 GMFBP1-201ENST00000467831 427 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AC096576.1-201ENST00000489014 359 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AC108078.1-201ENST00000508073 725 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AC091133.4-201ENST00000511142 308 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AC006199.1-201ENST00000548728 219 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 MIR4775-201ENST00000581168 75 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AL645944.1-201ENST00000603857 493 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AC008945.2-201ENST00000606056 604 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AL137790.1-201ENST00000634283 177 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 ASNSP3-201ENST00000451989 1306 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 AC092447.7-201ENST00000422212 1621 ntBASIC3.07□□□□□ -1.92
SNX30Q5VWJ9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 AC004944.1-201ENST00000517807 3059 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 SNORA9.2-201ENST00000365361 133 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 AL512633.1-201ENST00000399931 655 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 RNU4-46P-201ENST00000410818 138 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 AC022018.1-201ENST00000430685 241 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 AL596276.1-201ENST00000434465 418 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 AL135938.1-201ENST00000443141 297 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 AC117522.3-201ENST00000507974 584 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 HIGD1AP13-201ENST00000509878 289 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 MRPS36P2-201ENST00000512569 299 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms