Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP39Q53GS9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP39Q53GS9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
USP39Q53GS9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP39Q53GS9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP39Q53GS9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP39Q53GS9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP39Q53GS9 RNU6-1059P-201ENST00000363752 98 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 SNORD51-201ENST00000384320 80 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 RNU6-393P-201ENST00000384475 107 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 RNU6-306P-201ENST00000384617 107 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 Y_RNA.552-201ENST00000384665 112 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 RPL21P1-201ENST00000399532 476 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 MIR1250-201ENST00000408098 113 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 RNU6-55P-201ENST00000411092 107 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 RPL7AP73-201ENST00000413490 353 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 AL356968.1-201ENST00000416622 474 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.93□□□□□ -1.78
USP39Q53GS9 AC091390.3-201ENST00000426478 338 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.93□□□□□ -1.78
USP39Q53GS9 MRPS18BP2-201ENST00000434310 759 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 HSPD1P21-201ENST00000436541 245 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 DYNLT3P2-201ENST00000442517 295 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 PRDX3P3-201ENST00000447765 522 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 AL353752.1-201ENST00000454946 260 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.93□□□□□ -1.78
USP39Q53GS9 RPL31P13-201ENST00000484151 370 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 RPL23AP55-201ENST00000498163 452 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 VN1R104P-201ENST00000505115 1009 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP39Q53GS9 MTCO3P44-201ENST00000510977 541 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 MTND1P19-201ENST00000511780 315 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 HIGD1AP3-201ENST00000515857 278 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 AC100870.1-201ENST00000522035 505 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 YPEL5P3-201ENST00000547227 352 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 SETP7-201ENST00000552169 453 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.93□□□□□ -1.78
USP39Q53GS9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.93□□□□□ -1.78
USP39Q53GS9 AL138889.2-201ENST00000603883 242 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 AL161423.1-201ENST00000613700 262 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 AC103858.2-201ENST00000621471 543 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP39Q53GS9 MTND5P7-201ENST00000413558 1798 ntBASIC3.93□□□□□ -1.78
USP39Q53GS9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.93□□□□□ -1.78
USP39Q53GS9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
USP39Q53GS9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP39Q53GS9 SNORD62.1-201ENST00000362541 86 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 RNA5SP399-201ENST00000364003 117 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 Y_RNA.210-201ENST00000364161 110 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 RNU6-715P-201ENST00000365204 103 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 Y_RNA.380-201ENST00000365663 111 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP39Q53GS9 RNU6-842P-201ENST00000384269 107 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 MIR607-201ENST00000385241 96 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 RPL31P2-201ENST00000413849 377 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 SYF2P2-201ENST00000417620 583 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 RPL21P109-201ENST00000422213 475 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.92□□□□□ -1.78
USP39Q53GS9 RPS15AP10-201ENST00000432472 382 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.92□□□□□ -1.78
USP39Q53GS9 RPL35AP22-201ENST00000436855 335 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 CYCSP43-201ENST00000438233 310 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.92□□□□□ -1.78
USP39Q53GS9 AL133162.1-201ENST00000463228 453 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.92□□□□□ -1.78
USP39Q53GS9 RN7SL432P-201ENST00000484057 298 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 HMGB3P17-201ENST00000504195 649 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 RNU6-323P-201ENST00000521915 107 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 AC022616.4-201ENST00000522985 181 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP39Q53GS9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.92□□□□□ -1.78
USP39Q53GS9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.92□□□□□ -1.78
USP39Q53GS9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.92□□□□□ -1.78
USP39Q53GS9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.92□□□□□ -1.78
USP39Q53GS9 AC125232.2-201ENST00000592457 143 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 AC008162.1-201ENST00000604718 254 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 AL670379.4-201ENST00000605279 254 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 HMGB1P50-201ENST00000605814 607 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.92□□□□□ -1.78
USP39Q53GS9 AC048347.1-201ENST00000624621 427 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.92□□□□□ -1.78
USP39Q53GS9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP39Q53GS9 AC018555.1-201ENST00000567548 1980 ntBASIC3.92□□□□□ -1.78
USP39Q53GS9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP39Q53GS9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
USP39Q53GS9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP39Q53GS9 HSPA8P4-201ENST00000511877 1920 ntBASIC3.91□□□□□ -1.78
USP39Q53GS9 PABPC1P7-201ENST00000413177 1513 ntBASIC3.91□□□□□ -1.78
USP39Q53GS9 AC233263.6-201ENST00000631132 1963 ntBASIC3.91□□□□□ -1.78
USP39Q53GS9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP39Q53GS9 AL353746.1-201ENST00000566293 6881 ntBASIC3.91□□□□□ -1.78
USP39Q53GS9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP39Q53GS9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.91□□□□□ -1.78
USP39Q53GS9 SNORA7.2-201ENST00000364446 145 ntBASIC3.91□□□□□ -1.78
USP39Q53GS9 RNU6-1062P-201ENST00000383908 107 ntBASIC3.91□□□□□ -1.78
USP39Q53GS9 RNU6-434P-201ENST00000384376 107 ntBASIC3.91□□□□□ -1.78
USP39Q53GS9 SNORA41-201ENST00000384675 132 ntBASIC3.91□□□□□ -1.78
USP39Q53GS9 PTMAP5-201ENST00000393073 333 ntBASIC3.91□□□□□ -1.78
USP39Q53GS9 RPL21P24-201ENST00000413752 448 ntBASIC3.91□□□□□ -1.78
USP39Q53GS9 OSTCP8-201ENST00000445117 448 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms