Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 MAPK10-253ENST00000641010 4072 ntBASIC3.39□□□□□ -1.87
FOXF2Q12947 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXF2Q12947 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.38□□□□□ -1.87
FOXF2Q12947 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXF2Q12947 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXF2Q12947 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXF2Q12947 AC138393.1-203ENST00000327086 343 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 Y_RNA.314-201ENST00000365114 102 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 MIR449B-201ENST00000384995 97 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 RNU6-837P-201ENST00000391056 108 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 HSPE1P8-201ENST00000406997 288 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 MIR1302-6-201ENST00000408466 90 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXF2Q12947 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXF2Q12947 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.38□□□□□ -1.87
FOXF2Q12947 AL035423.1-201ENST00000420331 213 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXF2Q12947 FTH1P6-201ENST00000430768 320 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXF2Q12947 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXF2Q12947 AC084198.1-201ENST00000477747 402 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 RPL31P61-201ENST00000496160 376 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 AC105758.1-201ENST00000506038 399 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 Y_RNA.715-201ENST00000517082 110 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 RN7SKP258-201ENST00000517151 304 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXF2Q12947 SUB1P3-201ENST00000564581 315 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 MIR3128-201ENST00000581957 66 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXF2Q12947 AC008739.3-201ENST00000603262 127 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 AC002044.1-201ENST00000606707 158 ntBASIC3.38□□□□□ -1.87
FOXF2Q12947 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXF2Q12947 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
FOXF2Q12947 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
FOXF2Q12947 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXF2Q12947 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXF2Q12947 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXF2Q12947 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
FOXF2Q12947 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXF2Q12947 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
FOXF2Q12947 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXF2Q12947 Y_RNA.222-201ENST00000364264 102 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 RNU6-76P-201ENST00000384060 104 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 RNU6-356P-201ENST00000384140 107 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 RNU6-45P-201ENST00000384471 107 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 MT-TW-201ENST00000387382 68 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 RNA5SP39-201ENST00000411245 120 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 AC093578.1-201ENST00000415219 368 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 SYF2P2-201ENST00000417620 583 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXF2Q12947 YME1L1P1-201ENST00000429435 297 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 AL591704.1-201ENST00000432574 275 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 AL645568.3-201ENST00000433683 316 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 AC011816.1-201ENST00000441346 546 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 AC133473.1-201ENST00000455173 299 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 SNORD127-201ENST00000458892 86 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 SNORD108-201ENST00000459332 71 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXF2Q12947 RPL21P103-201ENST00000479921 488 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 AC108860.1-201ENST00000484521 383 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 RPS26P15-201ENST00000488067 348 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXF2Q12947 AC092436.3-201ENST00000511788 257 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXF2Q12947 AC026403.1-201ENST00000518938 295 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.37□□□□□ -1.87
FOXF2Q12947 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXF2Q12947 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXF2Q12947 AC174048.1-201ENST00000603389 144 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 MTND4LP5-201ENST00000605152 292 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 MIR15A-201ENST00000607334 83 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 AL355810.1-201ENST00000614629 552 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 AC103858.2-201ENST00000621471 543 ntBASIC3.37□□□□□ -1.87
FOXF2Q12947 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
FOXF2Q12947 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
FOXF2Q12947 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXF2Q12947 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
FOXF2Q12947 MFSD8-236ENST00000641509 4050 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXF2Q12947 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXF2Q12947 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXF2Q12947 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXF2Q12947 Y_RNA.60-201ENST00000362831 98 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 Y_RNA.117-201ENST00000363294 101 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 SNORA20.1-201ENST00000364790 130 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 Y_RNA.515-201ENST00000384535 112 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 MIR517A-201ENST00000385001 87 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXF2Q12947 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXF2Q12947 RPL26P6-201ENST00000440913 438 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.36□□□□□ -1.87
FOXF2Q12947 AC073910.1-201ENST00000445047 438 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.36□□□□□ -1.87
FOXF2Q12947 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
FOXF2Q12947 FTH1P25-201ENST00000447665 469 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 AL451050.1-201ENST00000450126 415 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 RNU7-187P-201ENST00000458985 68 ntBASIC3.36□□□□□ -1.87
FOXF2Q12947 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.36□□□□□ -1.87
FOXF2Q12947 HMGB3P17-201ENST00000504195 649 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms