Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL358072.1-201ENST00000604156 575 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.64□□□□□ -1.99
GABPAQ06546 MIR3670-4-201ENST00000612260 65 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 AL160394.1-201ENST00000624765 724 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
GABPAQ06546 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
GABPAQ06546 AC008669.1-201ENST00000565823 2178 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 AC080100.1-201ENST00000624239 5356 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 FGF7P2-201ENST00000332473 296 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 U8.3-201ENST00000363321 132 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 RNU1-91P-201ENST00000364746 163 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 OR5H15-201ENST00000383696 930 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 RNU6-817P-201ENST00000391083 104 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 FO393413.1-201ENST00000402892 195 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 RNU6-195P-201ENST00000411352 109 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.63□□□□□ -1.99
GABPAQ06546 ISCA1P1-201ENST00000426679 387 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 ISCA1P6-201ENST00000427740 390 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 GTF2IP20-201ENST00000431663 360 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 AC104850.1-201ENST00000435940 476 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 WASF1P1-201ENST00000447560 1131 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 FABP5P15-201ENST00000453566 214 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 AC139453.3-201ENST00000493276 369 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.63□□□□□ -1.99
GABPAQ06546 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.63□□□□□ -1.99
GABPAQ06546 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.63□□□□□ -1.99
GABPAQ06546 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.63□□□□□ -1.99
GABPAQ06546 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.63□□□□□ -1.99
GABPAQ06546 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.63□□□□□ -1.99
GABPAQ06546 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.63□□□□□ -1.99
GABPAQ06546 MIR3682-201ENST00000581338 84 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 MIR3124-201ENST00000582636 67 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.63□□□□□ -1.99
GABPAQ06546 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.63□□□□□ -1.99
GABPAQ06546 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.63□□□□□ -1.99
GABPAQ06546 AC019159.1-201ENST00000605094 187 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 AL365204.3-201ENST00000612448 685 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.63□□□□□ -1.99
GABPAQ06546 AC009831.4-201ENST00000620744 325 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
GABPAQ06546 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
GABPAQ06546 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
GABPAQ06546 AC099654.7-201ENST00000635788 2127 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AC073343.1-201ENST00000328239 651 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 HSPE1P11-201ENST00000339579 310 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 SNORA25.6-201ENST00000364121 118 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 RNU4-91P-201ENST00000364778 135 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 SNORA20.2-201ENST00000383922 131 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 RNU6-39P-201ENST00000384344 107 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 SNORA64-201ENST00000384674 134 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.62□□□□□ -1.99
GABPAQ06546 SKA2P1-201ENST00000425592 390 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AL591212.2-201ENST00000433923 257 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AC009296.1-201ENST00000443146 155 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 RPS15AP27-201ENST00000449183 343 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 FABP5P13-201ENST00000452144 328 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 snoU13.26-201ENST00000459452 105 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 RAP1BP2-201ENST00000478270 544 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AC105252.1-201ENST00000503089 286 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.62□□□□□ -1.99
GABPAQ06546 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.62□□□□□ -1.99
GABPAQ06546 RNU6-677P-201ENST00000516914 101 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.62□□□□□ -1.99
GABPAQ06546 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.62□□□□□ -1.99
GABPAQ06546 AP002453.2-201ENST00000533503 320 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.62□□□□□ -1.99
GABPAQ06546 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.62□□□□□ -1.99
GABPAQ06546 AC005498.1-201ENST00000592125 465 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 RPL23AP78-201ENST00000599928 470 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AL356575.1-201ENST00000603008 283 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 SEPT7P9-203ENST00000604116 343 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AP002360.4-201ENST00000606980 481 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AL161734.1-201ENST00000609720 557 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 DUSP12P1-201ENST00000612874 516 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AC130324.3-201ENST00000614165 542 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AP001506.1-201ENST00000615444 211 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.62□□□□□ -1.99
GABPAQ06546 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.62□□□□□ -1.99
GABPAQ06546 MTND5P42-201ENST00000637720 498 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 AC092881.1-201ENST00000638218 2733 ntBASIC2.62□□□□□ -1.99
GABPAQ06546 ELL2P3-201ENST00000457883 1602 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
GABPAQ06546 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
GABPAQ06546 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
GABPAQ06546 MIR6073-201ENST00000352083 89 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 RNU1-51P-201ENST00000365345 176 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 RNU1-109P-201ENST00000383960 147 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 RPS3AP36-201ENST00000398190 775 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 RNU6-193P-201ENST00000410977 107 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 RN7SKP142-201ENST00000411236 328 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 AC023141.4-201ENST00000412031 328 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 AC092809.3-201ENST00000415453 231 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 BX276092.3-201ENST00000424182 230 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.61□□□□□ -1.99
GABPAQ06546 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.61□□□□□ -1.99
GABPAQ06546 Z98742.2-201ENST00000431564 187 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 RPS15AP5-201ENST00000436276 388 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 AL022238.1-201ENST00000442557 355 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 MTND2P4-201ENST00000445034 1004 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 AC009961.3-201ENST00000449832 765 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms