| RUNX1T1 | Q06455 | RPS29P15-201 | ENST00000458329 | 171 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AL160314.1-201 | ENST00000490836 | 438 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | LINC02061-201 | ENST00000514225 | 335 nt | TSL 3 BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | Y_RNA.704-201 | ENST00000516851 | 102 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | SNORA31.21-201 | ENST00000517180 | 77 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC103853.2-201 | ENST00000519805 | 716 nt | TSL 3 BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AF117829.1-204 | ENST00000519854 | 284 nt | TSL 3 BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | MTND1P35-201 | ENST00000526739 | 508 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | OR5B19P-201 | ENST00000531766 | 928 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC005476.1-201 | ENST00000554427 | 397 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC092120.1-201 | ENST00000562211 | 420 nt | TSL 3 BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC007495.2-202 | ENST00000564102 | 535 nt | TSL 4 BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC034105.3-201 | ENST00000565294 | 442 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC024619.4-201 | ENST00000580924 | 316 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC008945.2-201 | ENST00000606056 | 604 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC012409.4-201 | ENST00000612923 | 249 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC090132.2-201 | ENST00000615881 | 347 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AL354950.2-201 | ENST00000617939 | 290 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | FER-210 | ENST00000628534 | 558 nt | TSL 5 BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | MTND5P42-201 | ENST00000637720 | 498 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | ATM-228 | ENST00000639240 | 498 nt | TSL 5 BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | ATM-230 | ENST00000640388 | 578 nt | TSL 5 BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC008669.1-201 | ENST00000565823 | 2178 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | MIPOL1-206 | ENST00000545536 | 2073 nt | TSL 5 BASIC | 3.02 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | GMFB-208 | ENST00000554908 | 6721 nt | TSL 1 (best) BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | MTND4P14-201 | ENST00000435799 | 1354 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | FTLP6-201 | ENST00000355274 | 422 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RNU6-1287P-201 | ENST00000362914 | 107 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | U3.6-201 | ENST00000363622 | 211 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | Y_RNA.256-201 | ENST00000364594 | 104 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | MAPK8-202 | ENST00000374174 | 739 nt | TSL 3 BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | LINC00587-201 | ENST00000374801 | 590 nt | TSL 1 (best) BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | SNORA69-201 | ENST00000383895 | 132 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | SNORD21-201 | ENST00000383953 | 95 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RNU6-1029P-201 | ENST00000384109 | 107 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RNU6-1060P-201 | ENST00000384664 | 107 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC068050.1-201 | ENST00000394891 | 380 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AL139095.1-201 | ENST00000404326 | 391 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RNU2-33P-201 | ENST00000410344 | 192 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RNU4-46P-201 | ENST00000410818 | 138 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC114491.1-201 | ENST00000416095 | 246 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC093106.2-201 | ENST00000428212 | 385 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | LINC00844-201 | ENST00000432535 | 477 nt | TSL 2 BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AL591212.2-201 | ENST00000433923 | 257 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AL353572.1-201 | ENST00000442490 | 417 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RPL32P28-201 | ENST00000443577 | 397 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | DPPA3P1-201 | ENST00000448050 | 469 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC004888.1-201 | ENST00000450480 | 547 nt | TSL 2 BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | KC877373.1-201 | ENST00000479066 | 408 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | SEM1P1-201 | ENST00000506694 | 209 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | CASP1P1-201 | ENST00000526345 | 212 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | MIR4703-201 | ENST00000577728 | 79 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC012493.2-201 | ENST00000595083 | 291 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AL591516.1-201 | ENST00000611326 | 274 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC022306.2-201 | ENST00000617563 | 647 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | YWHAEP7-203 | ENST00000622054 | 312 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | PROX1-AS1-244 | ENST00000630355 | 599 nt | TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC110079.1-202 | ENST00000635213 | 138 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | TAB3-203 | ENST00000378930 | 6255 nt | APPRIS P1 TSL 1 (best) BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC006020.1-201 | ENST00000420179 | 1854 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | ABCC9-202 | ENST00000261201 | 4650 nt | APPRIS ALT1 TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | MINDY3-202 | ENST00000378036 | 2452 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | KERA-201 | ENST00000266719 | 2162 nt | APPRIS P1 TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | NEBL-202 | ENST00000377122 | 9216 nt | TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | Y_RNA.89-201 | ENST00000363031 | 102 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RNU6-1090P-201 | ENST00000364065 | 94 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | Y_RNA.295-201 | ENST00000364918 | 102 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | SNORD115-7-201 | ENST00000365306 | 82 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AL591416.1-201 | ENST00000404015 | 867 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | OR6C66P-201 | ENST00000414917 | 930 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AL731684.2-201 | ENST00000426839 | 333 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | CST9LP2-201 | ENST00000437612 | 320 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC073326.1-201 | ENST00000451832 | 557 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC092989.1-201 | ENST00000481235 | 277 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC126121.2-201 | ENST00000486137 | 698 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RPL39P36-201 | ENST00000490784 | 156 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AIG1P1-201 | ENST00000503376 | 148 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC104806.1-201 | ENST00000508720 | 308 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC113385.1-201 | ENST00000511468 | 563 nt | TSL 4 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RNU4ATAC8P-201 | ENST00000516196 | 109 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RNU1-143P-201 | ENST00000516296 | 146 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | SNORD60.2-201 | ENST00000516883 | 86 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RNU6-143P-201 | ENST00000516942 | 93 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RNU6-835P-201 | ENST00000516974 | 104 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC011257.1-201 | ENST00000519048 | 281 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | OOSP2-203 | ENST00000532905 | 496 nt | APPRIS ALT2 TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC068205.1-204 | ENST00000532989 | 481 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC007458.1-201 | ENST00000542812 | 373 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | LINC02350-201 | ENST00000544419 | 480 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | G2E3-AS1-202 | ENST00000550118 | 609 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | HIGD1AP1-201 | ENST00000550979 | 275 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC009145.1-201 | ENST00000563230 | 433 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC113137.1-201 | ENST00000591869 | 558 nt | TSL 4 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AL451007.1-201 | ENST00000595491 | 289 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AC010620.2-201 | ENST00000600135 | 313 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | MACROD2-IT1-202 | ENST00000605675 | 575 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | U1.23-201 | ENST00000610293 | 146 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | AL355073.2-201 | ENST00000612106 | 557 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | DISC2.1-201 | ENST00000612827 | 205 nt | BASIC | 3 | □□□□□ -1.93 | | |
| RUNX1T1 | Q06455 | RNU1-68P-201 | ENST00000615382 | 146 nt | BASIC | 3 | □□□□□ -1.93 | | |