Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU6-764P-201ENST00000516396 105 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 RNA5SP468-201ENST00000516782 93 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.54□□□□□ -1.84
CLRN1P58418 MIR4273-201ENST00000582824 84 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 AC008121.1-201ENST00000603244 268 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 AL139395.1-201ENST00000603662 160 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 AP000787.2-201ENST00000604432 568 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.54□□□□□ -1.84
CLRN1P58418 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLRN1P58418 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.54□□□□□ -1.84
CLRN1P58418 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLRN1P58418 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.53□□□□□ -1.84
CLRN1P58418 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLRN1P58418 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLRN1P58418 IPO8P1-201ENST00000455509 3109 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLRN1P58418 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.53□□□□□ -1.84
CLRN1P58418 AC008725.1-201ENST00000605123 2263 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AP001486.2-201ENST00000561652 5113 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLRN1P58418 AC007685.1-201ENST00000329806 452 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 RN7SKP227-201ENST00000364445 330 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 RNU1-115P-201ENST00000365329 160 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 RNU6-463P-201ENST00000384340 107 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 MIR34A-201ENST00000385130 110 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.53□□□□□ -1.84
CLRN1P58418 C4BPAP2-201ENST00000428434 478 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 RPS15AP10-201ENST00000432472 382 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AL512844.2-201ENST00000433990 593 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.53□□□□□ -1.84
CLRN1P58418 AL356535.1-201ENST00000440335 398 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AC009220.1-201ENST00000451614 275 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 BTF3P15-201ENST00000455606 336 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 HMGN2P13-201ENST00000476476 274 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 FO393415.2-201ENST00000480085 343 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.53□□□□□ -1.84
CLRN1P58418 CASP1P1-201ENST00000526345 212 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AC103996.1-201ENST00000555468 102 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AL117187.1-201ENST00000555482 181 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.53□□□□□ -1.84
CLRN1P58418 AC092447.9-201ENST00000603395 144 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AC009314.1-201ENST00000603871 304 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AL161629.2-201ENST00000615347 275 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 AC112484.5-201ENST00000624189 228 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.53□□□□□ -1.84
CLRN1P58418 AC119674.1-207ENST00000641355 633 ntBASIC3.53□□□□□ -1.84
CLRN1P58418 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
CLRN1P58418 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CLRN1P58418 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CLRN1P58418 CDC27P3-201ENST00000635418 1910 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLRN1P58418 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.52□□□□□ -1.85
CLRN1P58418 FTLP6-201ENST00000355274 422 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 RNA5SP399-201ENST00000364003 117 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLRN1P58418 DEFB109C-201ENST00000382575 264 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 DEFB109B-201ENST00000382656 264 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 RNU6-574P-201ENST00000384265 107 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 MIR141-201ENST00000384975 95 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 AL117339.3-201ENST00000418733 162 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 RPL17P36-201ENST00000420302 549 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 AC098614.2-201ENST00000426040 255 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLRN1P58418 AC011742.1-201ENST00000431448 434 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 AL159987.2-201ENST00000432754 307 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 AL353997.1-201ENST00000432936 108 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.52□□□□□ -1.85
CLRN1P58418 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.52□□□□□ -1.85
CLRN1P58418 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.52□□□□□ -1.85
CLRN1P58418 AL451050.1-201ENST00000450126 415 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 snoU109.2-201ENST00000459316 135 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 MTATP8P1-201ENST00000467115 207 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.52□□□□□ -1.85
CLRN1P58418 AC069499.1-201ENST00000489433 509 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 RPL30P5-201ENST00000494923 336 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 AC022447.4-201ENST00000504053 364 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.52□□□□□ -1.85
CLRN1P58418 RN7SKP122-201ENST00000515923 296 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 RNA5SP179-201ENST00000517284 121 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLRN1P58418 CBX3P8-201ENST00000532412 525 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 OR8R1P-201ENST00000543943 764 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.52□□□□□ -1.85
CLRN1P58418 SUB1P3-201ENST00000564581 315 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 AC018889.1-201ENST00000605372 397 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 FP236240.3-201ENST00000623061 327 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 U6.99-201ENST00000637524 83 ntBASIC3.52□□□□□ -1.85
CLRN1P58418 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLRN1P58418 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLRN1P58418 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLRN1P58418 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLRN1P58418 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CLRN1P58418 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CLRN1P58418 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.51□□□□□ -1.85
CLRN1P58418 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLRN1P58418 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.51□□□□□ -1.85
CLRN1P58418 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLRN1P58418 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLRN1P58418 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms