Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CPT1AP50416 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CPT1AP50416 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CPT1AP50416 RNU6-522P-201ENST00000364497 107 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 RNU6-7-201ENST00000364784 107 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 RNU6-8-201ENST00000365467 107 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 SNORA4.3-201ENST00000365564 137 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 Y_RNA.373-201ENST00000365600 103 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 Y_RNA.378-201ENST00000365652 113 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CPT1AP50416 Y_RNA.500-201ENST00000384466 111 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 Y_RNA.510-201ENST00000384511 114 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 SNORD70.1-201ENST00000391007 85 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CPT1AP50416 UBE2D3P2-201ENST00000424409 445 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 RPL23AP69-201ENST00000431134 458 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.61□□□□□ -1.83
CPT1AP50416 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.61□□□□□ -1.83
CPT1AP50416 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.61□□□□□ -1.83
CPT1AP50416 RPS4XP2-201ENST00000458402 793 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 AC007547.1-201ENST00000462177 490 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 RPS23P3-201ENST00000470993 430 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 AC012181.1-201ENST00000479895 423 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 Y_RNA.654-201ENST00000497848 106 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 AC091951.2-201ENST00000500762 203 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 SUMO2P6-201ENST00000505273 288 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 HMGB3P15-201ENST00000507326 574 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.61□□□□□ -1.83
CPT1AP50416 AC046134.1-201ENST00000514454 666 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.61□□□□□ -1.83
CPT1AP50416 RNU6-1314P-201ENST00000517139 104 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 AC025253.1-201ENST00000613623 543 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 AP003400.5-201ENST00000624827 617 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 MTND4P35-201ENST00000604257 1375 ntBASIC3.61□□□□□ -1.83
CPT1AP50416 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CPT1AP50416 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CPT1AP50416 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CPT1AP50416 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.6□□□□□ -1.83
CPT1AP50416 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.6□□□□□ -1.83
CPT1AP50416 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CPT1AP50416 SNORA32.2-201ENST00000384049 122 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 RNU6-767P-201ENST00000384132 107 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 SNORA7.4-201ENST00000384249 137 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 RNU6-393P-201ENST00000384475 107 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 MIR325-201ENST00000385260 98 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 MIR301A-201ENST00000385261 86 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 RPL5P18-201ENST00000406671 891 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 ARF4P2-201ENST00000430209 526 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 GPM6BP2-201ENST00000432046 144 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 AC092573.2-201ENST00000434546 243 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 Z82210.1-201ENST00000440037 231 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 GPM6BP1-201ENST00000446387 144 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.6□□□□□ -1.83
CPT1AP50416 AL136097.1-201ENST00000456945 913 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 RNU6-1208P-201ENST00000459588 107 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 RPL21P41-201ENST00000459863 264 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 RPL30P5-201ENST00000494923 336 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 AC114781.4-201ENST00000513707 639 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 RNU6-875P-201ENST00000516488 106 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.6□□□□□ -1.83
CPT1AP50416 BTF3P12-201ENST00000519620 469 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 RPL7P20-201ENST00000520308 745 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.6□□□□□ -1.83
CPT1AP50416 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.6□□□□□ -1.83
CPT1AP50416 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.6□□□□□ -1.83
CPT1AP50416 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.6□□□□□ -1.83
CPT1AP50416 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.6□□□□□ -1.83
CPT1AP50416 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CPT1AP50416 MIR2682-201ENST00000580305 110 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 AC009994.1-201ENST00000606889 253 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 AC093913.1-201ENST00000614178 329 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 Y_RNA.804-201ENST00000615262 101 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 AC090740.1-201ENST00000623193 2262 ntBASIC3.6□□□□□ -1.83
CPT1AP50416 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
CPT1AP50416 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.59□□□□□ -1.83
CPT1AP50416 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CPT1AP50416 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CPT1AP50416 Y_RNA.100-201ENST00000363141 102 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 SNORA80A-201ENST00000363922 136 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 RNU6-82P-201ENST00000363970 107 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 RNU6-434P-201ENST00000384376 107 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 SNORA44-201ENST00000384584 132 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 SNORA16.2-201ENST00000390991 127 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CPT1AP50416 RNU6-1148P-201ENST00000410992 104 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 AL356968.1-201ENST00000416622 474 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 RPL35AP12-201ENST00000425362 338 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 RPL23AP82-202ENST00000427528 469 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 AL669831.1-202ENST00000428504 417 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 GTF2IP13-201ENST00000438487 386 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.59□□□□□ -1.83
CPT1AP50416 RPL7P12-201ENST00000446719 750 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.59□□□□□ -1.83
CPT1AP50416 FABP5P15-201ENST00000453566 214 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.59□□□□□ -1.83
CPT1AP50416 CENPBD1P1-201ENST00000464061 469 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 RPL21P93-201ENST00000480465 489 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 AC096576.1-201ENST00000489014 359 ntBASIC3.59□□□□□ -1.83
CPT1AP50416 AC009901.1-201ENST00000506703 541 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms