Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LHX1P48742 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LHX1P48742 Y_RNA.296-201ENST00000364930 108 ntBASIC2.8□□□□□ -1.96
LHX1P48742 SNORA4.3-201ENST00000365564 137 ntBASIC2.8□□□□□ -1.96
LHX1P48742 SNORD88.1-201ENST00000408684 91 ntBASIC2.8□□□□□ -1.96
LHX1P48742 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.8□□□□□ -1.96
LHX1P48742 RNU2-16P-201ENST00000410712 136 ntBASIC2.8□□□□□ -1.96
LHX1P48742 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.8□□□□□ -1.96
LHX1P48742 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.8□□□□□ -1.96
LHX1P48742 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.8□□□□□ -1.96
LHX1P48742 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.8□□□□□ -1.96
LHX1P48742 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.8□□□□□ -1.96
LHX1P48742 AL353729.1-201ENST00000425044 720 ntBASIC2.8□□□□□ -1.96
LHX1P48742 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LHX1P48742 HMGB1P9-201ENST00000429856 646 ntBASIC2.8□□□□□ -1.96
LHX1P48742 AC104332.2-201ENST00000429959 156 ntBASIC2.8□□□□□ -1.96
LHX1P48742 USP9YP14-201ENST00000430663 563 ntBASIC2.8□□□□□ -1.96
LHX1P48742 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.8□□□□□ -1.96
LHX1P48742 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.8□□□□□ -1.96
LHX1P48742 MTCO2P7-201ENST00000446518 666 ntBASIC2.8□□□□□ -1.96
LHX1P48742 RPL23AP11-201ENST00000475260 469 ntBASIC2.8□□□□□ -1.96
LHX1P48742 RPS27AP10-201ENST00000496103 208 ntBASIC2.8□□□□□ -1.96
LHX1P48742 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.8□□□□□ -1.96
LHX1P48742 RNU6-1315P-201ENST00000517187 99 ntBASIC2.8□□□□□ -1.96
LHX1P48742 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.8□□□□□ -1.96
LHX1P48742 OR4R1P-201ENST00000529879 463 ntBASIC2.8□□□□□ -1.96
LHX1P48742 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.8□□□□□ -1.96
LHX1P48742 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.8□□□□□ -1.96
LHX1P48742 AC103987.3-201ENST00000582071 292 ntBASIC2.8□□□□□ -1.96
LHX1P48742 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.8□□□□□ -1.96
LHX1P48742 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.8□□□□□ -1.96
LHX1P48742 NDUFA8P1-201ENST00000605525 367 ntBASIC2.8□□□□□ -1.96
LHX1P48742 Z99129.1-201ENST00000612510 255 ntBASIC2.8□□□□□ -1.96
LHX1P48742 AC011939.3-201ENST00000613686 466 ntBASIC2.8□□□□□ -1.96
LHX1P48742 AC009161.2-201ENST00000624626 138 ntBASIC2.8□□□□□ -1.96
LHX1P48742 AL157786.1-207ENST00000627771 695 ntBASIC2.8□□□□□ -1.96
LHX1P48742 U6.114-201ENST00000636407 96 ntBASIC2.8□□□□□ -1.96
LHX1P48742 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LHX1P48742 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LHX1P48742 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LHX1P48742 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.79□□□□□ -1.96
LHX1P48742 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LHX1P48742 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
LHX1P48742 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LHX1P48742 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LHX1P48742 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.79□□□□□ -1.96
LHX1P48742 SNORA62.1-201ENST00000364287 154 ntBASIC2.79□□□□□ -1.96
LHX1P48742 Y_RNA.318-201ENST00000365131 97 ntBASIC2.79□□□□□ -1.96
LHX1P48742 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.79□□□□□ -1.96
LHX1P48742 RNU6-658P-201ENST00000384606 106 ntBASIC2.79□□□□□ -1.96
LHX1P48742 MIR454-201ENST00000390180 115 ntBASIC2.79□□□□□ -1.96
LHX1P48742 CISD1P1-201ENST00000393907 327 ntBASIC2.79□□□□□ -1.96
LHX1P48742 AL139039.1-201ENST00000401900 692 ntBASIC2.79□□□□□ -1.96
LHX1P48742 GSTA9P-201ENST00000406231 611 ntBASIC2.79□□□□□ -1.96
LHX1P48742 RNU6-387P-201ENST00000411331 105 ntBASIC2.79□□□□□ -1.96
LHX1P48742 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.79□□□□□ -1.96
LHX1P48742 RPL7P10-201ENST00000417407 739 ntBASIC2.79□□□□□ -1.96
LHX1P48742 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.79□□□□□ -1.96
LHX1P48742 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.79□□□□□ -1.96
LHX1P48742 DPPA3P1-201ENST00000448050 469 ntBASIC2.79□□□□□ -1.96
LHX1P48742 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.79□□□□□ -1.96
LHX1P48742 AC103975.1-201ENST00000482506 483 ntBASIC2.79□□□□□ -1.96
LHX1P48742 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.79□□□□□ -1.96
LHX1P48742 RPS27P26-201ENST00000494583 239 ntBASIC2.79□□□□□ -1.96
LHX1P48742 RBBP4P6-201ENST00000508098 202 ntBASIC2.79□□□□□ -1.96
LHX1P48742 SNORD27.1-201ENST00000516319 72 ntBASIC2.79□□□□□ -1.96
LHX1P48742 AC022634.1-201ENST00000520765 532 ntBASIC2.79□□□□□ -1.96
LHX1P48742 RANP3-201ENST00000530970 276 ntBASIC2.79□□□□□ -1.96
LHX1P48742 OR5AL2P-201ENST00000532185 920 ntBASIC2.79□□□□□ -1.96
LHX1P48742 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.79□□□□□ -1.96
LHX1P48742 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.79□□□□□ -1.96
LHX1P48742 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.79□□□□□ -1.96
LHX1P48742 NACAP3-201ENST00000552100 481 ntBASIC2.79□□□□□ -1.96
LHX1P48742 AC009063.1-201ENST00000563342 702 ntBASIC2.79□□□□□ -1.96
LHX1P48742 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.79□□□□□ -1.96
LHX1P48742 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.79□□□□□ -1.96
LHX1P48742 AL627309.6-201ENST00000606857 840 ntBASIC2.79□□□□□ -1.96
LHX1P48742 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.79□□□□□ -1.96
LHX1P48742 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
LHX1P48742 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LHX1P48742 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
LHX1P48742 NACAP2-201ENST00000318548 624 ntBASIC2.78□□□□□ -1.96
LHX1P48742 RNU1-100P-201ENST00000365255 165 ntBASIC2.78□□□□□ -1.96
LHX1P48742 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LHX1P48742 MIR181B1-201ENST00000385240 110 ntBASIC2.78□□□□□ -1.96
LHX1P48742 RNU2-66P-201ENST00000410650 161 ntBASIC2.78□□□□□ -1.96
LHX1P48742 RNA5SP111-201ENST00000411386 101 ntBASIC2.78□□□□□ -1.96
LHX1P48742 USP9YP6-201ENST00000413550 854 ntBASIC2.78□□□□□ -1.96
LHX1P48742 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.78□□□□□ -1.96
LHX1P48742 BPY2DP-201ENST00000422208 265 ntBASIC2.78□□□□□ -1.96
LHX1P48742 AC073464.1-201ENST00000429823 534 ntBASIC2.78□□□□□ -1.96
LHX1P48742 GTF2IP20-201ENST00000431663 360 ntBASIC2.78□□□□□ -1.96
LHX1P48742 RPS15AP5-201ENST00000436276 388 ntBASIC2.78□□□□□ -1.96
LHX1P48742 AC011816.1-201ENST00000441346 546 ntBASIC2.78□□□□□ -1.96
LHX1P48742 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.78□□□□□ -1.96
LHX1P48742 MTATP6P7-201ENST00000453315 681 ntBASIC2.78□□□□□ -1.96
LHX1P48742 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.78□□□□□ -1.96
LHX1P48742 AC128713.1-201ENST00000471495 306 ntBASIC2.78□□□□□ -1.96
LHX1P48742 RN7SL499P-201ENST00000481141 276 ntBASIC2.78□□□□□ -1.96
LHX1P48742 AC079382.1-201ENST00000493346 557 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms