Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 Y_RNA.534-201ENST00000384599 112 ntBASIC3.26□□□□□ -1.89
RFC1P35251 CISD1P1-201ENST00000393907 327 ntBASIC3.26□□□□□ -1.89
RFC1P35251 RNA5SP118-201ENST00000410385 109 ntBASIC3.26□□□□□ -1.89
RFC1P35251 RNU6-1148P-201ENST00000410992 104 ntBASIC3.26□□□□□ -1.89
RFC1P35251 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.26□□□□□ -1.89
RFC1P35251 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.26□□□□□ -1.89
RFC1P35251 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.26□□□□□ -1.89
RFC1P35251 AL451062.2-201ENST00000427515 271 ntBASIC3.26□□□□□ -1.89
RFC1P35251 AL591212.2-201ENST00000433923 257 ntBASIC3.26□□□□□ -1.89
RFC1P35251 AC006028.1-201ENST00000438379 402 ntBASIC3.26□□□□□ -1.89
RFC1P35251 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.26□□□□□ -1.89
RFC1P35251 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.26□□□□□ -1.89
RFC1P35251 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.26□□□□□ -1.89
RFC1P35251 AC009901.1-201ENST00000506703 541 ntBASIC3.26□□□□□ -1.89
RFC1P35251 SLC25A15P5-201ENST00000508033 253 ntBASIC3.26□□□□□ -1.89
RFC1P35251 CASP1P1-201ENST00000526345 212 ntBASIC3.26□□□□□ -1.89
RFC1P35251 AP000867.2-201ENST00000532468 320 ntBASIC3.26□□□□□ -1.89
RFC1P35251 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.26□□□□□ -1.89
RFC1P35251 ADI1P3-201ENST00000549509 470 ntBASIC3.26□□□□□ -1.89
RFC1P35251 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.26□□□□□ -1.89
RFC1P35251 HMGB1P14-201ENST00000557424 591 ntBASIC3.26□□□□□ -1.89
RFC1P35251 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.26□□□□□ -1.89
RFC1P35251 AC002545.1-201ENST00000592511 181 ntBASIC3.26□□□□□ -1.89
RFC1P35251 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.26□□□□□ -1.89
RFC1P35251 NUTF2P8-201ENST00000604593 363 ntBASIC3.26□□□□□ -1.89
RFC1P35251 RNU6-89P-201ENST00000606519 100 ntBASIC3.26□□□□□ -1.89
RFC1P35251 MIR15A-201ENST00000607334 83 ntBASIC3.26□□□□□ -1.89
RFC1P35251 AC022306.2-201ENST00000617563 647 ntBASIC3.26□□□□□ -1.89
RFC1P35251 U6.42-201ENST00000618440 107 ntBASIC3.26□□□□□ -1.89
RFC1P35251 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.26□□□□□ -1.89
RFC1P35251 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RFC1P35251 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.26□□□□□ -1.89
RFC1P35251 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFC1P35251 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.25□□□□□ -1.89
RFC1P35251 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFC1P35251 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFC1P35251 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.25□□□□□ -1.89
RFC1P35251 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
RFC1P35251 Y_RNA.86-201ENST00000363020 111 ntBASIC3.25□□□□□ -1.89
RFC1P35251 Y_RNA.160-201ENST00000363677 92 ntBASIC3.25□□□□□ -1.89
RFC1P35251 Y_RNA.167-201ENST00000363735 109 ntBASIC3.25□□□□□ -1.89
RFC1P35251 RNU6-512P-201ENST00000364438 103 ntBASIC3.25□□□□□ -1.89
RFC1P35251 RNU5E-4P-201ENST00000364931 120 ntBASIC3.25□□□□□ -1.89
RFC1P35251 RNU6-116P-201ENST00000384042 109 ntBASIC3.25□□□□□ -1.89
RFC1P35251 SNORD15B-201ENST00000384714 146 ntBASIC3.25□□□□□ -1.89
RFC1P35251 EEF1A1P40-201ENST00000412883 573 ntBASIC3.25□□□□□ -1.89
RFC1P35251 TAAR7P-201ENST00000436141 242 ntBASIC3.25□□□□□ -1.89
RFC1P35251 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.25□□□□□ -1.89
RFC1P35251 SNRPFP3-201ENST00000457792 225 ntBASIC3.25□□□□□ -1.89
RFC1P35251 RNU6-953P-201ENST00000459154 107 ntBASIC3.25□□□□□ -1.89
RFC1P35251 HMGN2P26-201ENST00000463169 339 ntBASIC3.25□□□□□ -1.89
RFC1P35251 RPS20P22-201ENST00000473700 357 ntBASIC3.25□□□□□ -1.89
RFC1P35251 RN7SL504P-201ENST00000494496 287 ntBASIC3.25□□□□□ -1.89
RFC1P35251 SUMO2P6-201ENST00000505273 288 ntBASIC3.25□□□□□ -1.89
RFC1P35251 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.25□□□□□ -1.89
RFC1P35251 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.25□□□□□ -1.89
RFC1P35251 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.25□□□□□ -1.89
RFC1P35251 RNU6-914P-201ENST00000516749 109 ntBASIC3.25□□□□□ -1.89
RFC1P35251 RANP3-201ENST00000530970 276 ntBASIC3.25□□□□□ -1.89
RFC1P35251 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.25□□□□□ -1.89
RFC1P35251 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.25□□□□□ -1.89
RFC1P35251 AC078814.3-201ENST00000553036 491 ntBASIC3.25□□□□□ -1.89
RFC1P35251 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.25□□□□□ -1.89
RFC1P35251 AC098826.3-201ENST00000603823 466 ntBASIC3.25□□□□□ -1.89
RFC1P35251 AL161798.1-201ENST00000604630 131 ntBASIC3.25□□□□□ -1.89
RFC1P35251 AL670379.4-201ENST00000605279 254 ntBASIC3.25□□□□□ -1.89
RFC1P35251 BNIP3P10-201ENST00000605360 577 ntBASIC3.25□□□□□ -1.89
RFC1P35251 AL359547.2-201ENST00000615810 418 ntBASIC3.25□□□□□ -1.89
RFC1P35251 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.25□□□□□ -1.89
RFC1P35251 MTND1P37-201ENST00000636562 264 ntBASIC3.25□□□□□ -1.89
RFC1P35251 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFC1P35251 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RFC1P35251 AC092435.3-201ENST00000565538 3654 ntBASIC3.24□□□□□ -1.89
RFC1P35251 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
RFC1P35251 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
RFC1P35251 RNU6-1167P-201ENST00000363227 94 ntBASIC3.24□□□□□ -1.89
RFC1P35251 RNA5SP139-201ENST00000364340 117 ntBASIC3.24□□□□□ -1.89
RFC1P35251 Y_RNA.231-201ENST00000364358 102 ntBASIC3.24□□□□□ -1.89
RFC1P35251 RNU6-522P-201ENST00000364497 107 ntBASIC3.24□□□□□ -1.89
RFC1P35251 Y_RNA.279-201ENST00000364763 95 ntBASIC3.24□□□□□ -1.89
RFC1P35251 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RFC1P35251 RNU6-1127P-201ENST00000384580 107 ntBASIC3.24□□□□□ -1.89
RFC1P35251 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RFC1P35251 SNORD67-201ENST00000390833 111 ntBASIC3.24□□□□□ -1.89
RFC1P35251 SNORD37.1-201ENST00000390968 65 ntBASIC3.24□□□□□ -1.89
RFC1P35251 AL606923.1-201ENST00000406616 190 ntBASIC3.24□□□□□ -1.89
RFC1P35251 Y_RNA.615-201ENST00000410769 117 ntBASIC3.24□□□□□ -1.89
RFC1P35251 RNU4-46P-201ENST00000410818 138 ntBASIC3.24□□□□□ -1.89
RFC1P35251 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.24□□□□□ -1.89
RFC1P35251 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.24□□□□□ -1.89
RFC1P35251 RPL21P111-201ENST00000418453 477 ntBASIC3.24□□□□□ -1.89
RFC1P35251 BTF3L4P3-201ENST00000418879 476 ntBASIC3.24□□□□□ -1.89
RFC1P35251 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.24□□□□□ -1.89
RFC1P35251 AL121601.2-201ENST00000438019 707 ntBASIC3.24□□□□□ -1.89
RFC1P35251 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.24□□□□□ -1.89
RFC1P35251 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.24□□□□□ -1.89
RFC1P35251 AC009237.8-201ENST00000445492 379 ntBASIC3.24□□□□□ -1.89
RFC1P35251 AC104058.1-201ENST00000448028 297 ntBASIC3.24□□□□□ -1.89
RFC1P35251 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.24□□□□□ -1.89
RFC1P35251 AC010099.1-201ENST00000455434 375 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms