Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.76□□□□□ -1.65
LIG1P18858 PARP1P2-201ENST00000556806 195 ntBASIC4.76□□□□□ -1.65
LIG1P18858 BNIP3P5-201ENST00000562290 498 ntBASIC4.76□□□□□ -1.65
LIG1P18858 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.76□□□□□ -1.65
LIG1P18858 AC244505.7-201ENST00000599675 272 ntBASIC4.76□□□□□ -1.65
LIG1P18858 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.76□□□□□ -1.65
LIG1P18858 AL731566.2-201ENST00000618971 317 ntBASIC4.76□□□□□ -1.65
LIG1P18858 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIG1P18858 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIG1P18858 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LIG1P18858 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LIG1P18858 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.75□□□□□ -1.65
LIG1P18858 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LIG1P18858 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.75□□□□□ -1.65
LIG1P18858 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.75□□□□□ -1.65
LIG1P18858 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIG1P18858 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LIG1P18858 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LIG1P18858 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIG1P18858 RNU6-770P-201ENST00000363929 105 ntBASIC4.75□□□□□ -1.65
LIG1P18858 SNORA20.1-201ENST00000364790 130 ntBASIC4.75□□□□□ -1.65
LIG1P18858 RNU6-1062P-201ENST00000383908 107 ntBASIC4.75□□□□□ -1.65
LIG1P18858 Y_RNA.515-201ENST00000384535 112 ntBASIC4.75□□□□□ -1.65
LIG1P18858 RNU6-837P-201ENST00000391056 108 ntBASIC4.75□□□□□ -1.65
LIG1P18858 MIR1179-201ENST00000408703 91 ntBASIC4.75□□□□□ -1.65
LIG1P18858 AC063979.1-201ENST00000415539 377 ntBASIC4.75□□□□□ -1.65
LIG1P18858 CRYBB2P1-203ENST00000415709 538 ntBASIC4.75□□□□□ -1.65
LIG1P18858 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.75□□□□□ -1.65
LIG1P18858 AC139712.2-201ENST00000424302 339 ntBASIC4.75□□□□□ -1.65
LIG1P18858 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.75□□□□□ -1.65
LIG1P18858 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.75□□□□□ -1.65
LIG1P18858 UQCRHP4-201ENST00000471686 272 ntBASIC4.75□□□□□ -1.65
LIG1P18858 AC113155.1-201ENST00000511141 769 ntBASIC4.75□□□□□ -1.65
LIG1P18858 RNA5SP519-201ENST00000516480 119 ntBASIC4.75□□□□□ -1.65
LIG1P18858 IGKV2-38-201ENST00000517443 247 ntBASIC4.75□□□□□ -1.65
LIG1P18858 AC144568.1-201ENST00000520139 137 ntBASIC4.75□□□□□ -1.65
LIG1P18858 HSPE1P20-201ENST00000538133 289 ntBASIC4.75□□□□□ -1.65
LIG1P18858 AC006600.1-201ENST00000572529 153 ntBASIC4.75□□□□□ -1.65
LIG1P18858 CPDP1-201ENST00000579660 283 ntBASIC4.75□□□□□ -1.65
LIG1P18858 AL590392.1-201ENST00000604960 446 ntBASIC4.75□□□□□ -1.65
LIG1P18858 RAC1P9-201ENST00000604990 392 ntBASIC4.75□□□□□ -1.65
LIG1P18858 AC034102.8-201ENST00000615146 484 ntBASIC4.75□□□□□ -1.65
LIG1P18858 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.75□□□□□ -1.65
LIG1P18858 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIG1P18858 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LIG1P18858 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
LIG1P18858 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.75□□□□□ -1.65
LIG1P18858 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIG1P18858 AC027290.2-201ENST00000623210 18662 ntBASIC4.74□□□□□ -1.65
LIG1P18858 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
LIG1P18858 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LIG1P18858 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LIG1P18858 MIR383-201ENST00000362257 73 ntBASIC4.74□□□□□ -1.65
LIG1P18858 Y_RNA.48-201ENST00000362710 103 ntBASIC4.74□□□□□ -1.65
LIG1P18858 Y_RNA.60-201ENST00000362831 98 ntBASIC4.74□□□□□ -1.65
LIG1P18858 RNU4-50P-201ENST00000364361 141 ntBASIC4.74□□□□□ -1.65
LIG1P18858 Y_RNA.324-201ENST00000365165 102 ntBASIC4.74□□□□□ -1.65
LIG1P18858 MIR625-201ENST00000385047 85 ntBASIC4.74□□□□□ -1.65
LIG1P18858 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIG1P18858 RNU2-38P-201ENST00000410856 79 ntBASIC4.74□□□□□ -1.65
LIG1P18858 RNU6-325P-201ENST00000411132 105 ntBASIC4.74□□□□□ -1.65
LIG1P18858 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.74□□□□□ -1.65
LIG1P18858 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.74□□□□□ -1.65
LIG1P18858 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.74□□□□□ -1.65
LIG1P18858 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.74□□□□□ -1.65
LIG1P18858 RNA5SP49-201ENST00000516450 115 ntBASIC4.74□□□□□ -1.65
LIG1P18858 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.74□□□□□ -1.65
LIG1P18858 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.74□□□□□ -1.65
LIG1P18858 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.74□□□□□ -1.65
LIG1P18858 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.74□□□□□ -1.65
LIG1P18858 AC020914.4-201ENST00000597690 277 ntBASIC4.74□□□□□ -1.65
LIG1P18858 AL773545.4-201ENST00000637262 310 ntBASIC4.74□□□□□ -1.65
LIG1P18858 AL513478.4-201ENST00000641636 310 ntBASIC4.74□□□□□ -1.65
LIG1P18858 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIG1P18858 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LIG1P18858 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIG1P18858 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIG1P18858 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
LIG1P18858 AP001486.2-201ENST00000561652 5113 ntBASIC4.74□□□□□ -1.65
LIG1P18858 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIG1P18858 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LIG1P18858 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.73□□□□□ -1.65
LIG1P18858 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LIG1P18858 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LIG1P18858 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
LIG1P18858 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIG1P18858 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIG1P18858 Y_RNA.26-201ENST00000362539 101 ntBASIC4.73□□□□□ -1.65
LIG1P18858 Y_RNA.64-201ENST00000362845 102 ntBASIC4.73□□□□□ -1.65
LIG1P18858 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.73□□□□□ -1.65
LIG1P18858 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.73□□□□□ -1.65
LIG1P18858 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.73□□□□□ -1.65
LIG1P18858 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.73□□□□□ -1.65
LIG1P18858 RPL39P38-201ENST00000467018 153 ntBASIC4.73□□□□□ -1.65
LIG1P18858 RPS4XP13-201ENST00000483219 789 ntBASIC4.73□□□□□ -1.65
LIG1P18858 RPS15AP34-201ENST00000487776 387 ntBASIC4.73□□□□□ -1.65
LIG1P18858 RN7SL691P-201ENST00000494487 301 ntBASIC4.73□□□□□ -1.65
LIG1P18858 UBE2CP3-201ENST00000502715 450 ntBASIC4.73□□□□□ -1.65
LIG1P18858 RNU6-927P-201ENST00000516199 100 ntBASIC4.73□□□□□ -1.65
LIG1P18858 Y_RNA.687-201ENST00000516558 91 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms