Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.28□□□□□ -2.37
TOP2AP11388 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.28□□□□□ -2.37
TOP2AP11388 AC021739.1-201ENST00000559631 174 ntBASIC0.28□□□□□ -2.37
TOP2AP11388 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.28□□□□□ -2.37
TOP2AP11388 AC100821.1-201ENST00000523153 2479 ntBASIC0.28□□□□□ -2.37
TOP2AP11388 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
TOP2AP11388 RNU1-124P-201ENST00000363861 145 ntBASIC0.27□□□□□ -2.37
TOP2AP11388 RNU6-968P-201ENST00000384076 107 ntBASIC0.27□□□□□ -2.37
TOP2AP11388 RPL21P24-201ENST00000413752 448 ntBASIC0.27□□□□□ -2.37
TOP2AP11388 AC079140.2-201ENST00000506193 142 ntBASIC0.27□□□□□ -2.37
TOP2AP11388 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.27□□□□□ -2.37
TOP2AP11388 AC013470.4-201ENST00000619978 986 ntBASIC0.27□□□□□ -2.37
TOP2AP11388 Y_RNA.60-201ENST00000362831 98 ntBASIC0.26□□□□□ -2.37
TOP2AP11388 SNORA31.8-201ENST00000516327 108 ntBASIC0.26□□□□□ -2.37
TOP2AP11388 AC090115.3-201ENST00000553218 849 ntBASIC0.26□□□□□ -2.37
TOP2AP11388 AL021879.1-201ENST00000611756 288 ntBASIC0.26□□□□□ -2.37
TOP2AP11388 AC022202.1-201ENST00000613515 211 ntBASIC0.26□□□□□ -2.37
TOP2AP11388 RNU6-348P-201ENST00000384386 107 ntBASIC0.25□□□□□ -2.37
TOP2AP11388 RNU6-45P-201ENST00000384471 107 ntBASIC0.25□□□□□ -2.37
TOP2AP11388 AC023141.4-201ENST00000412031 328 ntBASIC0.25□□□□□ -2.37
TOP2AP11388 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.25□□□□□ -2.37
TOP2AP11388 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.25□□□□□ -2.37
TOP2AP11388 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.25□□□□□ -2.37
TOP2AP11388 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.25□□□□□ -2.37
TOP2AP11388 HMGB1P14-201ENST00000557424 591 ntBASIC0.25□□□□□ -2.37
TOP2AP11388 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.25□□□□□ -2.37
TOP2AP11388 AC018618.2-201ENST00000604770 446 ntBASIC0.25□□□□□ -2.37
TOP2AP11388 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
TOP2AP11388 RNU1-23P-201ENST00000363361 144 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 SNORA40.19-201ENST00000390846 128 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 RPL23AP95-201ENST00000426806 265 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 AC004854.1-201ENST00000440356 349 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.24□□□□□ -2.37
TOP2AP11388 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 TRBVA-201ENST00000498804 316 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 RN7SKP277-201ENST00000516895 283 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.24□□□□□ -2.37
TOP2AP11388 MTCO2P2-201ENST00000591258 225 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 AC024060.1-201ENST00000607052 494 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 AP000254.1-201ENST00000609934 520 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.24□□□□□ -2.37
TOP2AP11388 AC010329.5-201ENST00000623497 2174 ntBASIC0.24□□□□□ -2.37
TOP2AP11388 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.23□□□□□ -2.37
TOP2AP11388 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
TOP2AP11388 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.23□□□□□ -2.37
TOP2AP11388 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.23□□□□□ -2.37
TOP2AP11388 OR52A4P-202ENST00000481634 799 ntBASIC0.23□□□□□ -2.37
TOP2AP11388 AC133963.2-201ENST00000513686 578 ntBASIC0.23□□□□□ -2.37
TOP2AP11388 RNU4-54P-201ENST00000516428 129 ntBASIC0.23□□□□□ -2.37
TOP2AP11388 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
TOP2AP11388 Y_RNA.390-201ENST00000383932 102 ntBASIC0.23□□□□□ -2.37
TOP2AP11388 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.23□□□□□ -2.37
TOP2AP11388 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.23□□□□□ -2.37
TOP2AP11388 AP001025.1-201ENST00000486139 332 ntBASIC0.23□□□□□ -2.37
TOP2AP11388 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.23□□□□□ -2.37
TOP2AP11388 CYCTP-201ENST00000504253 315 ntBASIC0.23□□□□□ -2.37
TOP2AP11388 AC121161.1-201ENST00000510606 652 ntBASIC0.23□□□□□ -2.37
TOP2AP11388 AC005741.1-201ENST00000511094 432 ntBASIC0.23□□□□□ -2.37
TOP2AP11388 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
TOP2AP11388 RNU1-58P-201ENST00000362413 163 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 MIR608-201ENST00000384820 100 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 MIR518A2-201ENST00000384966 87 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
TOP2AP11388 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
TOP2AP11388 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.22□□□□□ -2.37
TOP2AP11388 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 AL606489.2-201ENST00000433886 234 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.22□□□□□ -2.37
TOP2AP11388 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.22□□□□□ -2.37
TOP2AP11388 AC112492.4-201ENST00000456549 352 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.22□□□□□ -2.37
TOP2AP11388 AC118282.2-201ENST00000508739 374 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 MTCYBP16-201ENST00000509187 1129 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 SNORD116-28-201ENST00000516123 91 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 AC068276.1-201ENST00000605793 379 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 AC126177.8-201ENST00000618339 1015 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 AC139769.3-201ENST00000618383 175 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
TOP2AP11388 GDI2P1-201ENST00000429312 1336 ntBASIC0.22□□□□□ -2.37
TOP2AP11388 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.21□□□□□ -2.38
TOP2AP11388 Y_RNA.518-201ENST00000384552 113 ntBASIC0.21□□□□□ -2.38
TOP2AP11388 CENPUP1-201ENST00000526649 1202 ntBASIC0.21□□□□□ -2.38
TOP2AP11388 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.21□□□□□ -2.38
TOP2AP11388 MIR3609-201ENST00000582661 80 ntBASIC0.21□□□□□ -2.38
TOP2AP11388 BX322635.1-201ENST00000605804 496 ntBASIC0.21□□□□□ -2.38
TOP2AP11388 AL355810.1-201ENST00000614629 552 ntBASIC0.21□□□□□ -2.38
TOP2AP11388 AC099842.1-201ENST00000619919 596 ntBASIC0.21□□□□□ -2.38
TOP2AP11388 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.21□□□□□ -2.38
TOP2AP11388 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
TOP2AP11388 SNORD18A-201ENST00000363753 72 ntBASIC0.2□□□□□ -2.38
TOP2AP11388 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.2□□□□□ -2.38
TOP2AP11388 AL358794.1-201ENST00000445689 381 ntBASIC0.2□□□□□ -2.38
TOP2AP11388 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.2□□□□□ -2.38
TOP2AP11388 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.2□□□□□ -2.38
TOP2AP11388 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.2□□□□□ -2.38
TOP2AP11388 RNU6-700P-201ENST00000391043 107 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 AC069282.1-201ENST00000411911 526 ntBASIC0.19□□□□□ -2.38
TOP2AP11388 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.19□□□□□ -2.38
TOP2AP11388 MTCYBP24-201ENST00000420387 1106 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms