Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.08□□□□□ -1.92
LDLRP01130 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.08□□□□□ -1.92
LDLRP01130 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.08□□□□□ -1.92
LDLRP01130 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.08□□□□□ -1.92
LDLRP01130 SUB1P2-201ENST00000556401 297 ntBASIC3.08□□□□□ -1.92
LDLRP01130 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.08□□□□□ -1.92
LDLRP01130 AC098848.2-201ENST00000588023 330 ntBASIC3.08□□□□□ -1.92
LDLRP01130 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.08□□□□□ -1.92
LDLRP01130 AC005498.1-201ENST00000592125 465 ntBASIC3.08□□□□□ -1.92
LDLRP01130 AC022432.1-201ENST00000595739 310 ntBASIC3.08□□□□□ -1.92
LDLRP01130 RPL12P50-201ENST00000603116 116 ntBASIC3.08□□□□□ -1.92
LDLRP01130 AC013553.2-201ENST00000604244 589 ntBASIC3.08□□□□□ -1.92
LDLRP01130 AC007621.1-201ENST00000604544 437 ntBASIC3.08□□□□□ -1.92
LDLRP01130 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.08□□□□□ -1.92
LDLRP01130 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.08□□□□□ -1.92
LDLRP01130 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.08□□□□□ -1.92
LDLRP01130 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LDLRP01130 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LDLRP01130 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LDLRP01130 MTND5P19-201ENST00000424872 1794 ntBASIC3.07□□□□□ -1.92
LDLRP01130 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.07□□□□□ -1.92
LDLRP01130 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LDLRP01130 SNORA51.4-201ENST00000364993 124 ntBASIC3.07□□□□□ -1.92
LDLRP01130 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LDLRP01130 SMIM11P1-201ENST00000369586 178 ntBASIC3.07□□□□□ -1.92
LDLRP01130 Y_RNA.394-201ENST00000383942 103 ntBASIC3.07□□□□□ -1.92
LDLRP01130 RNU6-641P-201ENST00000384006 107 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL513331.1-201ENST00000411908 397 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.07□□□□□ -1.92
LDLRP01130 NDUFB4P5-201ENST00000415445 361 ntBASIC3.07□□□□□ -1.92
LDLRP01130 SNRPEP10-201ENST00000420249 274 ntBASIC3.07□□□□□ -1.92
LDLRP01130 NDUFB4P7-201ENST00000423198 363 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL513185.2-201ENST00000425543 193 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.07□□□□□ -1.92
LDLRP01130 GPR143P-201ENST00000434155 205 ntBASIC3.07□□□□□ -1.92
LDLRP01130 RPL7P54-201ENST00000438336 674 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.07□□□□□ -1.92
LDLRP01130 RPL36AP51-201ENST00000487216 318 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AC023194.1-201ENST00000493084 308 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.07□□□□□ -1.92
LDLRP01130 AC117522.3-201ENST00000507974 584 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.07□□□□□ -1.92
LDLRP01130 RN7SKP258-201ENST00000517151 304 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AP006587.4-201ENST00000526053 529 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AC093027.1-201ENST00000546698 429 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.07□□□□□ -1.92
LDLRP01130 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.07□□□□□ -1.92
LDLRP01130 MIR4276-201ENST00000584832 70 ntBASIC3.07□□□□□ -1.92
LDLRP01130 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.07□□□□□ -1.92
LDLRP01130 AL162413.1-201ENST00000603198 110 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL670379.6-201ENST00000603753 252 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL670379.11-201ENST00000604059 253 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AC008162.1-201ENST00000604718 254 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL670379.1-201ENST00000604752 252 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL033523.1-201ENST00000605153 153 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL670379.5-201ENST00000605253 252 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL670379.12-201ENST00000605291 253 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL670379.8-201ENST00000605353 252 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AC007619.2-201ENST00000605743 379 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL670379.7-201ENST00000605823 252 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL121992.2-201ENST00000606262 256 ntBASIC3.07□□□□□ -1.92
LDLRP01130 AL050343.2-201ENST00000607338 280 ntBASIC3.07□□□□□ -1.92
LDLRP01130 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.07□□□□□ -1.92
LDLRP01130 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.07□□□□□ -1.92
LDLRP01130 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.07□□□□□ -1.92
LDLRP01130 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.07□□□□□ -1.92
LDLRP01130 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LDLRP01130 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDLRP01130 AC073343.1-201ENST00000328239 651 ntBASIC3.06□□□□□ -1.92
LDLRP01130 MIR422A-201ENST00000362286 90 ntBASIC3.06□□□□□ -1.92
LDLRP01130 Y_RNA.22-201ENST00000362492 102 ntBASIC3.06□□□□□ -1.92
LDLRP01130 RNU4-79P-201ENST00000362764 141 ntBASIC3.06□□□□□ -1.92
LDLRP01130 SNORA5B-201ENST00000363786 132 ntBASIC3.06□□□□□ -1.92
LDLRP01130 SNORD81.2-201ENST00000365153 76 ntBASIC3.06□□□□□ -1.92
LDLRP01130 MIR558-201ENST00000384920 94 ntBASIC3.06□□□□□ -1.92
LDLRP01130 MIR1-2-201ENST00000384961 85 ntBASIC3.06□□□□□ -1.92
LDLRP01130 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LDLRP01130 RNU6-1197P-201ENST00000391183 107 ntBASIC3.06□□□□□ -1.92
LDLRP01130 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.06□□□□□ -1.92
LDLRP01130 RPS4XP8-201ENST00000402039 771 ntBASIC3.06□□□□□ -1.92
LDLRP01130 FAT1P1-201ENST00000406588 507 ntBASIC3.06□□□□□ -1.92
LDLRP01130 RNU2-39P-201ENST00000410604 198 ntBASIC3.06□□□□□ -1.92
LDLRP01130 RN7SKP58-201ENST00000411010 305 ntBASIC3.06□□□□□ -1.92
LDLRP01130 OR9R1P-201ENST00000412200 877 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AL354751.2-201ENST00000415471 210 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AC114491.1-201ENST00000416095 246 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AL353678.1-201ENST00000422735 741 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.06□□□□□ -1.92
LDLRP01130 AL353705.1-201ENST00000433468 480 ntBASIC3.06□□□□□ -1.92
LDLRP01130 TAAR7P-201ENST00000436141 242 ntBASIC3.06□□□□□ -1.92
LDLRP01130 NDUFB4P6-201ENST00000436819 366 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.06□□□□□ -1.92
LDLRP01130 RPS15AP9-201ENST00000439856 381 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.06□□□□□ -1.92
LDLRP01130 AC025750.2-201ENST00000442609 450 ntBASIC3.06□□□□□ -1.92
LDLRP01130 NEFMP1-201ENST00000443423 1006 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AC009237.8-201ENST00000445492 379 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.06□□□□□ -1.92
LDLRP01130 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.06□□□□□ -1.92
LDLRP01130 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms