Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN3O15551 AP003461.1-201ENST00000528866 78 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.38□□□□□ -2.03
CLDN3O15551 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN3O15551 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.38□□□□□ -2.03
CLDN3O15551 PRELID2P1-201ENST00000552837 301 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 AC027807.1-201ENST00000559921 996 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN3O15551 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLDN3O15551 MIR3945-201ENST00000581853 98 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 SNORD14A-201ENST00000606526 91 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN3O15551 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.38□□□□□ -2.03
CLDN3O15551 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLDN3O15551 AC005858.4-201ENST00000623191 700 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CLDN3O15551 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLDN3O15551 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN3O15551 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN3O15551 SNORA48.3-201ENST00000391081 134 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 RPS24P7-201ENST00000416921 246 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 AC098592.1-201ENST00000419352 333 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.37□□□□□ -2.03
CLDN3O15551 AC004383.1-201ENST00000438135 289 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 AC118469.1-201ENST00000442943 488 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.37□□□□□ -2.03
CLDN3O15551 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.37□□□□□ -2.03
CLDN3O15551 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.37□□□□□ -2.03
CLDN3O15551 RPL9P6-201ENST00000492764 598 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 AC116655.1-201ENST00000508324 901 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 RNU1-41P-201ENST00000516161 162 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 RNU2-10P-201ENST00000516375 211 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 RNU1-48P-201ENST00000516400 162 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 SCARNA16.3-201ENST00000516595 184 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 RNU6-678P-201ENST00000516832 109 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 RNU6-1092P-201ENST00000516955 87 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 AC009902.1-201ENST00000519351 183 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 AC107934.1-201ENST00000522215 217 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 LINC00933-203ENST00000559812 219 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN3O15551 AC022893.3-201ENST00000607665 437 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 AL365204.3-201ENST00000612448 685 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 AC130324.3-201ENST00000614165 542 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN3O15551 AC093591.3-201ENST00000634516 308 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 CU459211.1-201ENST00000635667 749 ntBASIC2.37□□□□□ -2.03
CLDN3O15551 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLDN3O15551 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.36□□□□□ -2.03
CLDN3O15551 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.36□□□□□ -2.03
CLDN3O15551 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN3O15551 RNU6-511P-201ENST00000363496 107 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 RNU5E-6P-201ENST00000365574 115 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 RNU6-898P-201ENST00000365627 104 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 Z98749.2-208ENST00000381646 500 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 RNU6-748P-201ENST00000384648 107 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 SNORA80E-201ENST00000384744 137 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 U6atac.2-201ENST00000408644 118 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 RPL22P18-201ENST00000417197 377 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN3O15551 EIF4EP4-201ENST00000424916 578 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN3O15551 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.36□□□□□ -2.03
CLDN3O15551 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.36□□□□□ -2.03
CLDN3O15551 IFNA11P-201ENST00000446352 526 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN3O15551 BTF3P15-201ENST00000455606 336 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 RPL36AP48-201ENST00000485521 314 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 AC107222.1-201ENST00000510899 637 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 AF131216.2-201ENST00000512316 564 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 SMURF2P1-201ENST00000514992 481 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 ACA59.2-201ENST00000517061 156 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 SNORA31.19-201ENST00000517079 126 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN3O15551 AC011979.2-201ENST00000527568 352 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN3O15551 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN3O15551 MIR4648-201ENST00000580107 72 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 LRRC37A5P-203ENST00000580181 585 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 RPS15AP11-201ENST00000594193 385 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 AP000240.1-201ENST00000609910 452 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 AC245884.12-201ENST00000615364 59 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 MIR6134-201ENST00000617606 109 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 AL356266.1-201ENST00000623311 483 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 AC092192.1-201ENST00000633154 1018 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 AC007671.2-201ENST00000637344 619 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 TEX21P-201ENST00000447107 1476 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 Z75746.1-201ENST00000440243 2080 ntBASIC2.36□□□□□ -2.03
CLDN3O15551 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN3O15551 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.35□□□□□ -2.03
CLDN3O15551 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.35□□□□□ -2.03
CLDN3O15551 CDC27P3-201ENST00000635418 1910 ntBASIC2.35□□□□□ -2.03
CLDN3O15551 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN3O15551 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
CLDN3O15551 RNU6-190P-201ENST00000384154 102 ntBASIC2.35□□□□□ -2.03
CLDN3O15551 MIR1302-8-201ENST00000408342 128 ntBASIC2.35□□□□□ -2.03
CLDN3O15551 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.35□□□□□ -2.03
CLDN3O15551 AC013410.2-201ENST00000422627 201 ntBASIC2.35□□□□□ -2.03
CLDN3O15551 RPS3AP44-201ENST00000425466 790 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms