Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.84□□□□□ -1.95
O00370 MTND1P37-201ENST00000636562 264 ntBASIC2.84□□□□□ -1.95
O00370 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
O00370 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.84□□□□□ -1.96
O00370 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
O00370 Y_RNA.22-201ENST00000362492 102 ntBASIC2.83□□□□□ -1.96
O00370 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
O00370 Y_RNA.500-201ENST00000384466 111 ntBASIC2.83□□□□□ -1.96
O00370 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.83□□□□□ -1.96
O00370 AC114491.1-201ENST00000416095 246 ntBASIC2.83□□□□□ -1.96
O00370 MED13P1-201ENST00000428342 171 ntBASIC2.83□□□□□ -1.96
O00370 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
O00370 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.83□□□□□ -1.96
O00370 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.83□□□□□ -1.96
O00370 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.83□□□□□ -1.96
O00370 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.83□□□□□ -1.96
O00370 CECR9-201ENST00000453421 199 ntBASIC2.83□□□□□ -1.96
O00370 RNU6-953P-201ENST00000459154 107 ntBASIC2.83□□□□□ -1.96
O00370 SUMO2P6-201ENST00000505273 288 ntBASIC2.83□□□□□ -1.96
O00370 AC090572.1-201ENST00000519251 160 ntBASIC2.83□□□□□ -1.96
O00370 ATP5F1P5-201ENST00000526403 760 ntBASIC2.83□□□□□ -1.96
O00370 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.83□□□□□ -1.96
O00370 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.83□□□□□ -1.96
O00370 AC078795.2-201ENST00000602835 1252 ntBASIC2.83□□□□□ -1.96
O00370 AL356575.1-201ENST00000603008 283 ntBASIC2.83□□□□□ -1.96
O00370 AC104763.2-201ENST00000604179 382 ntBASIC2.83□□□□□ -1.96
O00370 NDUFA8P1-201ENST00000605525 367 ntBASIC2.83□□□□□ -1.96
O00370 RPL23AP88-201ENST00000605759 454 ntBASIC2.83□□□□□ -1.96
O00370 AC008536.2-201ENST00000607284 349 ntBASIC2.83□□□□□ -1.96
O00370 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.83□□□□□ -1.96
O00370 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.83□□□□□ -1.96
O00370 AC005858.4-201ENST00000623191 700 ntBASIC2.83□□□□□ -1.96
O00370 AC010297.1-201ENST00000623948 149 ntBASIC2.83□□□□□ -1.96
O00370 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.83□□□□□ -1.96
O00370 AL512643.1-201ENST00000635735 524 ntBASIC2.83□□□□□ -1.96
O00370 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
O00370 AC068137.4-201ENST00000638485 296 ntBASIC2.83□□□□□ -1.96
O00370 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
O00370 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
O00370 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
O00370 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
O00370 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
O00370 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
O00370 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.82□□□□□ -1.96
O00370 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.82□□□□□ -1.96
O00370 SNORA62.1-201ENST00000364287 154 ntBASIC2.82□□□□□ -1.96
O00370 Y_RNA.367-201ENST00000365544 101 ntBASIC2.82□□□□□ -1.96
O00370 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
O00370 DEFA7P-201ENST00000382676 285 ntBASIC2.82□□□□□ -1.96
O00370 RNU1-109P-201ENST00000383960 147 ntBASIC2.82□□□□□ -1.96
O00370 RNU6-140P-201ENST00000384566 108 ntBASIC2.82□□□□□ -1.96
O00370 Y_RNA.582-201ENST00000391023 95 ntBASIC2.82□□□□□ -1.96
O00370 AL139095.1-201ENST00000404326 391 ntBASIC2.82□□□□□ -1.96
O00370 USP9YP6-201ENST00000413550 854 ntBASIC2.82□□□□□ -1.96
O00370 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.82□□□□□ -1.96
O00370 AC073464.1-201ENST00000429823 534 ntBASIC2.82□□□□□ -1.96
O00370 AC092427.1-202ENST00000430569 476 ntBASIC2.82□□□□□ -1.96
O00370 GPM6BP2-201ENST00000432046 144 ntBASIC2.82□□□□□ -1.96
O00370 RPL36AP53-201ENST00000432891 316 ntBASIC2.82□□□□□ -1.96
O00370 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.82□□□□□ -1.96
O00370 BNIP3P2-201ENST00000441221 577 ntBASIC2.82□□□□□ -1.96
O00370 GPM6BP1-201ENST00000446387 144 ntBASIC2.82□□□□□ -1.96
O00370 AC027673.1-201ENST00000456245 405 ntBASIC2.82□□□□□ -1.96
O00370 AC023194.1-201ENST00000493084 308 ntBASIC2.82□□□□□ -1.96
O00370 AC082651.2-201ENST00000496833 166 ntBASIC2.82□□□□□ -1.96
O00370 AIG1P1-201ENST00000503376 148 ntBASIC2.82□□□□□ -1.96
O00370 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.82□□□□□ -1.96
O00370 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.82□□□□□ -1.96
O00370 RNA5SP356-201ENST00000515972 94 ntBASIC2.82□□□□□ -1.96
O00370 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.82□□□□□ -1.96
O00370 Y_RNA.689-201ENST00000516589 107 ntBASIC2.82□□□□□ -1.96
O00370 RPPH1-2P-201ENST00000516688 293 ntBASIC2.82□□□□□ -1.96
O00370 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.82□□□□□ -1.96
O00370 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.82□□□□□ -1.96
O00370 AP001646.1-201ENST00000527936 915 ntBASIC2.82□□□□□ -1.96
O00370 OR5B19P-201ENST00000531766 928 ntBASIC2.82□□□□□ -1.96
O00370 OR5AL2P-201ENST00000532185 920 ntBASIC2.82□□□□□ -1.96
O00370 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.82□□□□□ -1.96
O00370 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.82□□□□□ -1.96
O00370 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.82□□□□□ -1.96
O00370 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.82□□□□□ -1.96
O00370 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.82□□□□□ -1.96
O00370 MIR4635-201ENST00000583759 79 ntBASIC2.82□□□□□ -1.96
O00370 OR1M4P-201ENST00000589199 287 ntBASIC2.82□□□□□ -1.96
O00370 AC060766.3-201ENST00000591442 263 ntBASIC2.82□□□□□ -1.96
O00370 AL161798.1-201ENST00000604630 131 ntBASIC2.82□□□□□ -1.96
O00370 AC007684.1-201ENST00000609671 477 ntBASIC2.82□□□□□ -1.96
O00370 AC007998.5-201ENST00000622938 237 ntBASIC2.82□□□□□ -1.96
O00370 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.82□□□□□ -1.96
O00370 OR5AK4P-201ENST00000635912 903 ntBASIC2.82□□□□□ -1.96
O00370 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.82□□□□□ -1.96
O00370 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
O00370 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.81□□□□□ -1.96
O00370 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.81□□□□□ -1.96
O00370 RNU6-179P-201ENST00000363350 107 ntBASIC2.81□□□□□ -1.96
O00370 SNORA5B-201ENST00000363786 132 ntBASIC2.81□□□□□ -1.96
O00370 RN7SKP226-201ENST00000364912 300 ntBASIC2.81□□□□□ -1.96
O00370 SET-203ENST00000372688 801 ntTSL 2 BASIC2.81□□□□□ -1.96
O00370 RNU6-259P-201ENST00000383999 107 ntBASIC2.81□□□□□ -1.96
O00370 SNORA24.1-201ENST00000384401 135 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms