Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 ZNF355P-201ENST00000427301 3216 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 ELL2P3-201ENST00000457883 1602 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 FGF7P2-201ENST00000332473 296 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 Y_RNA.77-201ENST00000362962 107 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU4-40P-201ENST00000364351 143 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNY3P13-201ENST00000365542 102 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-1197P-201ENST00000391183 107 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPS4XP3-201ENST00000398541 413 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL079342.1-201ENST00000401460 267 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 RN7SKP32-201ENST00000410167 303 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-1140P-201ENST00000410517 106 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC092047.1-201ENST00000424997 240 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 Z98742.2-201ENST00000431564 187 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 BNIP3P2-201ENST00000441221 577 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 Y_RNA.638-201ENST00000459374 113 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPS20P20-201ENST00000460498 340 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC113155.1-201ENST00000511141 769 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC022447.1-201ENST00000515358 464 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-1256P-201ENST00000516539 103 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AP000867.2-201ENST00000532468 320 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC119751.7-201ENST00000600494 245 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC073544.2-201ENST00000601155 540 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL590229.1-201ENST00000603497 542 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC068276.1-201ENST00000605793 379 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-87P-201ENST00000607561 108 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC027309.3-201ENST00000623419 351 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIR4275-201ENST00000636486 87 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL390237.1-201ENST00000404226 1415 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC092104.1-201ENST00000497346 1441 ntBASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.13□□□□□ -2.07
TMX2-CTNND1H3BSU7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU5E-1-201ENST00000362477 120 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-348P-201ENST00000384386 107 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNY3P10-201ENST00000384764 102 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL591416.1-201ENST00000404015 867 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 TXNP7-201ENST00000406296 293 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU2-36P-201ENST00000410361 191 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 Y_RNA.598-201ENST00000410480 95 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL513331.1-201ENST00000411908 397 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPS3AP3-201ENST00000411933 242 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 HMGN1P14-201ENST00000412459 517 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTCO2P16-201ENST00000436962 677 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTND4P32-201ENST00000437189 1237 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTCO1P19-201ENST00000443487 500 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC009237.8-201ENST00000445492 379 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC104058.1-201ENST00000448028 297 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTND1P29-201ENST00000448112 647 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 GAPDHP17-201ENST00000449858 1001 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTND1P12-201ENST00000455231 147 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL122001.1-201ENST00000457027 370 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPL23AP70-201ENST00000483361 460 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTND1P3-201ENST00000484956 952 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC090255.1-201ENST00000495779 349 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC114797.1-201ENST00000514003 728 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNA5SP337-201ENST00000517007 109 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AMZ2P1-203ENST00000565833 850 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC005771.1-201ENST00000585581 349 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AF038458.1-201ENST00000588406 262 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPS15AP11-201ENST00000594193 385 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC008739.2-201ENST00000597006 317 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC080013.6-201ENST00000606185 215 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms