Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 MIR222-201ENST00000384992 110 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 RNU2-47P-201ENST00000410649 186 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 RNU2-15P-201ENST00000410692 191 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AC006461.1-201ENST00000412637 326 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 NDUFS5P4-201ENST00000412983 318 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 PNRC2P1-201ENST00000423940 420 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 MTND1P33-201ENST00000446251 917 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AC245102.2-201ENST00000448956 180 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AP001324.2-201ENST00000461163 319 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AC114982.1-201ENST00000469402 321 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AC108729.1-201ENST00000487812 947 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 RPS27AP10-201ENST00000496103 208 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 ACA64.5-201ENST00000516207 127 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 RNU6-113P-201ENST00000516653 101 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 SNORA31.22-201ENST00000517204 135 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 BNIP3P23-201ENST00000599655 511 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AL713866.2-201ENST00000603579 219 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AL021879.1-201ENST00000611756 288 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 STMN1P1-201ENST00000617809 440 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 AP003400.6-201ENST00000624698 740 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 RNU6-968P-201ENST00000384076 107 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 RNA5SP100-201ENST00000410903 110 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 RNA5SP59-201ENST00000410922 110 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 AC069282.1-201ENST00000411911 526 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 RPS15AP12-201ENST00000419498 388 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 Z82205.1-201ENST00000428456 297 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 SCARNA16.2-201ENST00000516520 172 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 AP005136.1-201ENST00000579765 429 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 AC005261.5-201ENST00000596280 355 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 AL391646.1-201ENST00000603860 190 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 AC008945.2-201ENST00000606056 604 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.61□□□□□ -2.31
TRAV30A0A087WSZ9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 AL591034.2-201ENST00000402839 359 ntBASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 RNU2-64P-201ENST00000411315 191 ntBASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 AP000275.1-201ENST00000411943 390 ntBASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 AC244505.3-201ENST00000454598 187 ntBASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 PSMC1P5-201ENST00000512850 177 ntBASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 CBX3P8-201ENST00000532412 525 ntBASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 VN1R107P-201ENST00000601784 209 ntBASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 AC018618.2-201ENST00000604770 446 ntBASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 ELOCP5-201ENST00000604924 333 ntBASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 AC091965.5-201ENST00000624785 342 ntBASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 AC083865.1-201ENST00000636634 831 ntBASIC0.6□□□□□ -2.31
TRAV30A0A087WSZ9 AL109755.1-201ENST00000401791 649 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 Y_RNA.595-201ENST00000410403 105 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 AC009518.2-201ENST00000418056 731 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 AC097463.2-201ENST00000421074 142 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 AC007919.1-201ENST00000429380 217 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 DUXAP8-207ENST00000456786 622 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 TOMM22P6-201ENST00000465035 409 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 HMGN1P7-201ENST00000491722 313 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 TRMT112P2-201ENST00000512910 132 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 BBIP1P1-201ENST00000602999 279 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 AC108706.1-201ENST00000611053 297 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 AC106800.4-201ENST00000614905 153 ntBASIC0.59□□□□□ -2.31
TRAV30A0A087WSZ9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 RNU1-23P-201ENST00000363361 144 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 SNORD1A-201ENST00000364968 72 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 SNORA18.2-201ENST00000383865 132 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 RNU6-152P-201ENST00000384037 107 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 MIR1267-201ENST00000408723 78 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 RNU2-68P-201ENST00000410878 191 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 USP9YP33-201ENST00000412220 421 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 AC004941.2-201ENST00000427009 228 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 RPL7P34-201ENST00000433316 712 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 CALM1P1-201ENST00000442082 433 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 ARL2BPP4-201ENST00000506854 471 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 AC108078.2-201ENST00000510750 236 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 SNORD116-28-201ENST00000516123 91 ntBASIC0.58□□□□□ -2.32
TRAV30A0A087WSZ9 RNU6-991P-201ENST00000516168 107 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms