Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MTND1P28-201ENST00000435623 950 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 USP9YP22-201ENST00000438971 294 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 PTGES3P1-201ENST00000439531 483 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 AL161651.1-201ENST00000440882 223 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 AL360221.1-201ENST00000445989 335 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.41□□□□□ -2.18
CISHQ9NSE2 AC018437.1-201ENST00000492214 406 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 AC026414.1-201ENST00000504046 698 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 RNU6-237P-201ENST00000515985 71 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 RNU6-927P-201ENST00000516199 100 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 AC005261.5-201ENST00000596280 355 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 AC126118.1-201ENST00000607744 628 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.41□□□□□ -2.18
CISHQ9NSE2 AC019226.1-201ENST00000625666 515 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.41□□□□□ -2.18
CISHQ9NSE2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.41□□□□□ -2.18
CISHQ9NSE2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
CISHQ9NSE2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CISHQ9NSE2 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.4□□□□□ -2.19
CISHQ9NSE2 AL161781.1-201ENST00000354277 403 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 RNU1-72P-201ENST00000362976 153 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 RNU5B-1-201ENST00000363286 116 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 RNU6-997P-201ENST00000384725 107 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.4□□□□□ -2.19
CISHQ9NSE2 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.4□□□□□ -2.19
CISHQ9NSE2 AC009474.2-201ENST00000451383 136 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 AC244505.3-201ENST00000454598 187 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.4□□□□□ -2.19
CISHQ9NSE2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.4□□□□□ -2.19
CISHQ9NSE2 RPS29P29-201ENST00000456396 171 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 CYP2C59P-201ENST00000457790 269 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.4□□□□□ -2.19
CISHQ9NSE2 AC110760.3-202ENST00000515177 371 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.4□□□□□ -2.19
CISHQ9NSE2 AP003497.1-201ENST00000528472 562 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 SLC2A13P1-201ENST00000531560 322 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 MIR3167-201ENST00000579623 85 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 MIR4285-201ENST00000581001 85 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 AL353997.4-201ENST00000586196 166 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.4□□□□□ -2.19
CISHQ9NSE2 MTCYBP22-201ENST00000603788 447 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 DUSP12P1-201ENST00000612874 516 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 AC107075.1-201ENST00000613695 314 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 TUG1_2.1-201ENST00000614234 87 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 MIR5739-201ENST00000619803 80 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 LINC02211-204ENST00000642024 1070 ntBASIC1.4□□□□□ -2.19
CISHQ9NSE2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CISHQ9NSE2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CISHQ9NSE2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.39□□□□□ -2.19
CISHQ9NSE2 RNU6-97P-201ENST00000363387 104 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 MIR518A2-201ENST00000384966 87 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 SNORA40.19-201ENST00000390846 128 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 RPL22P22-201ENST00000395439 379 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 VN1R36P-201ENST00000414936 291 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.39□□□□□ -2.19
CISHQ9NSE2 PTGES3P4-201ENST00000426243 356 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 AC092634.2-201ENST00000428146 1010 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.39□□□□□ -2.19
CISHQ9NSE2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.39□□□□□ -2.19
CISHQ9NSE2 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.39□□□□□ -2.19
CISHQ9NSE2 AC021382.1-201ENST00000483523 359 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 RNA5SP458-201ENST00000516188 119 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 AC087441.2-201ENST00000529141 262 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.39□□□□□ -2.19
CISHQ9NSE2 AC022254.1-201ENST00000567857 235 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.39□□□□□ -2.19
CISHQ9NSE2 AL583856.2-201ENST00000606298 543 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.39□□□□□ -2.19
CISHQ9NSE2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.39□□□□□ -2.19
CISHQ9NSE2 Z99571.1-201ENST00000636677 394 ntBASIC1.39□□□□□ -2.19
CISHQ9NSE2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.39□□□□□ -2.19
CISHQ9NSE2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
CISHQ9NSE2 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CISHQ9NSE2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CISHQ9NSE2 RNU1-62P-201ENST00000362599 164 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 MIR95-201ENST00000385072 81 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 RNU2-68P-201ENST00000410878 191 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 AC079776.3-201ENST00000450665 370 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 AP001324.2-201ENST00000461163 319 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 MTCYBP35-201ENST00000503630 1137 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 MTCYBP16-201ENST00000509187 1129 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 MTND5P13-201ENST00000513046 1079 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 SMURF2P1-201ENST00000514992 481 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 SNORA4.4-201ENST00000515921 135 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.38□□□□□ -2.19
CISHQ9NSE2 MTCO2P15-201ENST00000532655 656 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 AC022880.1-201ENST00000534017 973 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 ROCK1P1-201ENST00000573767 549 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 MIR3124-201ENST00000582636 67 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 MIR3660-201ENST00000584845 100 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 AF129408.1-201ENST00000608767 431 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 AC009237.15-201ENST00000610252 501 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
CISHQ9NSE2 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms