Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AP000889.1-201ENST00000530968 660 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 SNORD39.3-201ENST00000584451 71 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AC013244.2-201ENST00000603396 103 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AC136601.2-201ENST00000604356 474 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 MIR6857-201ENST00000613267 93 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AL136313.1-201ENST00000624804 202 ntBASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.58□□□□□ -2.32
CDC42SE2Q9NRR3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 RNU2-33P-201ENST00000410344 192 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 AC097463.2-201ENST00000421074 142 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 AC008850.1-201ENST00000427546 362 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 SNRPFP4-201ENST00000456366 242 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 MTCO3P2-201ENST00000457365 171 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 AP001025.1-201ENST00000486139 332 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 RPS3AP22-201ENST00000488297 769 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 AC103851.1-201ENST00000506833 274 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 RNA5SP404-201ENST00000517118 132 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 AC124293.1-201ENST00000530034 493 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 OR5B19P-201ENST00000531766 928 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 RAB11AP2-201ENST00000545905 639 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 AC027104.1-201ENST00000563702 681 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 MIR3167-201ENST00000579623 85 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 BNIP3P23-201ENST00000599655 511 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 FAM71BP1-201ENST00000604431 523 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 AC080078.3-201ENST00000605407 463 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 AC008121.3-201ENST00000618726 433 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 AC083865.1-201ENST00000636634 831 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 AL391516.1-201ENST00000554380 2449 ntBASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CDC42SE2Q9NRR3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 ENSAP3-201ENST00000312710 333 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 RNA5SP327-201ENST00000362494 101 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 MIR597-201ENST00000384968 97 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 MIR146A-201ENST00000385201 99 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 USP9YP26-201ENST00000421008 661 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 USP9YP18-201ENST00000425912 695 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 USP9YP17-201ENST00000444617 696 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC245102.2-201ENST00000448956 180 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC244505.3-201ENST00000454598 187 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 COX6CP14-201ENST00000469580 174 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 RPS23P4-201ENST00000487908 423 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC018437.1-201ENST00000492214 406 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC112198.4-201ENST00000515450 351 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AP006587.4-201ENST00000526053 529 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC012414.6-201ENST00000568241 401 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 CYP2C61P-201ENST00000604072 290 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC091152.3-201ENST00000604227 325 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 ELOCP5-201ENST00000604924 333 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC097468.3-201ENST00000607956 456 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC091895.1-201ENST00000624494 256 ntBASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.56□□□□□ -2.32
CDC42SE2Q9NRR3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 RNU6-53P-201ENST00000365367 106 ntBASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 RNU6-26P-201ENST00000383985 107 ntBASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 AL591034.2-201ENST00000402839 359 ntBASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 USP9YP19-201ENST00000412165 485 ntBASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 USP9YP13-201ENST00000417797 480 ntBASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 MTCO1P44-201ENST00000441935 243 ntBASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 AC108729.1-201ENST00000487812 947 ntBASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 CBX3P8-201ENST00000532412 525 ntBASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 AP005136.1-201ENST00000579765 429 ntBASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 MTND1P37-201ENST00000636562 264 ntBASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CDC42SE2Q9NRR3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CDC42SE2Q9NRR3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
CDC42SE2Q9NRR3 Y_RNA.327-201ENST00000365201 102 ntBASIC0.54□□□□□ -2.32
CDC42SE2Q9NRR3 SNORA29-201ENST00000384183 140 ntBASIC0.54□□□□□ -2.32
CDC42SE2Q9NRR3 MIR515-2-201ENST00000384883 83 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms