Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC013262.1-201ENST00000426710 252 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.36□□□□□ -2.19
VCX3BQ9H321 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.36□□□□□ -2.19
VCX3BQ9H321 AL354941.1-201ENST00000438600 464 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC020550.1-201ENST00000447385 163 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC079448.1-201ENST00000449377 373 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AL353705.4-201ENST00000449661 238 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.36□□□□□ -2.19
VCX3BQ9H321 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AMD1P1-201ENST00000457220 922 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VCX3BQ9H321 MTND5P13-201ENST00000513046 1079 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 RN7SKP179-201ENST00000516126 217 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 RNU6-927P-201ENST00000516199 100 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 DEFB131D-201ENST00000526803 184 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC005832.3-201ENST00000537929 631 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 NDUFA5P6-201ENST00000542110 379 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.36□□□□□ -2.19
VCX3BQ9H321 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC008507.2-201ENST00000588402 1176 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AF038458.1-201ENST00000588406 262 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC091152.3-201ENST00000604227 325 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC116312.1-201ENST00000606841 314 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC103710.2-201ENST00000609912 942 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC018926.1-201ENST00000616335 435 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 AC231657.1-201ENST00000624313 397 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.36□□□□□ -2.19
VCX3BQ9H321 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL136360.1-201ENST00000503377 1900 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 RNU6-223P-201ENST00000362830 107 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 Y_RNA.110-201ENST00000363220 99 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 RNU6-744P-201ENST00000365557 107 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 RNU6-1316P-201ENST00000384242 108 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
VCX3BQ9H321 SNORA40.2-201ENST00000390847 128 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL590084.1-201ENST00000407885 387 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.35□□□□□ -2.19
VCX3BQ9H321 MTND4P3-201ENST00000417829 541 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 DPH3P2-201ENST00000422618 250 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 USP9YP24-201ENST00000434374 697 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 MTATP6P30-201ENST00000443540 664 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 PTENP1-201ENST00000447117 1215 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.35□□□□□ -2.19
VCX3BQ9H321 CECR9-201ENST00000453421 199 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC112492.4-201ENST00000456549 352 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC104563.1-201ENST00000476147 376 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC099513.1-201ENST00000490423 301 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.35□□□□□ -2.19
VCX3BQ9H321 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC110760.3-202ENST00000515177 371 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 RNU6-150P-201ENST00000516237 95 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC006199.1-201ENST00000548728 219 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL136520.1-202ENST00000555494 763 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.35□□□□□ -2.19
VCX3BQ9H321 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC021171.1-201ENST00000603137 706 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL670379.6-201ENST00000603753 252 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL670379.11-201ENST00000604059 253 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL670379.10-201ENST00000604330 253 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC008162.1-201ENST00000604718 254 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL670379.1-201ENST00000604752 252 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL670379.2-201ENST00000604983 252 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL670379.5-201ENST00000605253 252 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL670379.4-201ENST00000605279 254 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL670379.12-201ENST00000605291 253 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL670379.8-201ENST00000605353 252 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL670379.9-201ENST00000605428 253 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL670379.7-201ENST00000605823 252 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC009237.15-201ENST00000610252 501 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AC006338.1-201ENST00000618453 749 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 AL512427.1-201ENST00000618593 349 ntBASIC1.35□□□□□ -2.19
VCX3BQ9H321 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
VCX3BQ9H321 MIR29C-201ENST00000385231 88 ntBASIC1.34□□□□□ -2.19
VCX3BQ9H321 MIR1283-2-201ENST00000408621 87 ntBASIC1.34□□□□□ -2.19
VCX3BQ9H321 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.34□□□□□ -2.19
VCX3BQ9H321 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.34□□□□□ -2.19
VCX3BQ9H321 AL161651.1-201ENST00000440882 223 ntBASIC1.34□□□□□ -2.19
VCX3BQ9H321 AC007677.1-201ENST00000445757 515 ntBASIC1.34□□□□□ -2.19
VCX3BQ9H321 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.34□□□□□ -2.19
VCX3BQ9H321 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.34□□□□□ -2.19
VCX3BQ9H321 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.34□□□□□ -2.19
VCX3BQ9H321 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.34□□□□□ -2.19
VCX3BQ9H321 AC008481.1-201ENST00000463278 396 ntBASIC1.34□□□□□ -2.19
VCX3BQ9H321 AC018437.1-201ENST00000492214 406 ntBASIC1.34□□□□□ -2.19
VCX3BQ9H321 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.34□□□□□ -2.19
VCX3BQ9H321 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.34□□□□□ -2.19
VCX3BQ9H321 AC023538.1-201ENST00000534576 736 ntBASIC1.34□□□□□ -2.19
VCX3BQ9H321 AC135279.1-201ENST00000543493 504 ntBASIC1.34□□□□□ -2.19
VCX3BQ9H321 AP002770.2-201ENST00000543613 532 ntBASIC1.34□□□□□ -2.19
VCX3BQ9H321 AL132657.2-201ENST00000564417 358 ntBASIC1.34□□□□□ -2.19
VCX3BQ9H321 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.34□□□□□ -2.19
VCX3BQ9H321 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
VCX3BQ9H321 RNU5E-1-201ENST00000362477 120 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms