Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC010133.1-201ENST00000615809 842 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AC019226.1-201ENST00000625666 515 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AC091948.2-201ENST00000636510 279 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 RNU6-486P-201ENST00000363116 107 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 RNU6-457P-201ENST00000363999 107 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 RNU6-19P-201ENST00000384718 107 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 MTCO1P56-201ENST00000401674 224 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC007435.1-201ENST00000421086 415 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC244636.1-201ENST00000421152 228 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 ISCA1P6-201ENST00000427740 390 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 VN1R108P-201ENST00000431580 830 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 COX7BP2-201ENST00000437976 242 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 MTND4P6-201ENST00000438297 472 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC017099.1-201ENST00000448261 1028 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AMD1P1-201ENST00000457220 922 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC140059.1-201ENST00000489238 361 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AL160314.1-201ENST00000490836 438 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 HMGB1P35-201ENST00000503360 598 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 LINC00933-203ENST00000559812 219 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC104072.1-201ENST00000568817 668 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 VN1R80P-201ENST00000597126 338 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 AC008759.3-201ENST00000613300 508 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 MIR3199-2-201ENST00000636243 86 ntBASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CCDC112Q8NEF3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AL359854.1-201ENST00000614203 1594 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 RNU6-1207P-201ENST00000384343 107 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 MIR1304-201ENST00000408243 91 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 RN7SKP51-201ENST00000410781 304 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 NDUFS5P4-201ENST00000412983 318 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 SNRPEP9-201ENST00000436794 238 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AC092473.1-201ENST00000441098 221 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AC009238.1-201ENST00000442165 424 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 MTND6P13-201ENST00000443510 523 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AC009237.6-201ENST00000446969 424 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 MTND1P9-201ENST00000453775 944 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 MTCO3P27-201ENST00000514397 196 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 SNORA4.4-201ENST00000515921 135 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 SNORD53B-201ENST00000577887 78 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AL357094.1-201ENST00000603845 844 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AC004805.2-201ENST00000605382 482 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AC099785.1-201ENST00000605697 437 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AL512598.1-201ENST00000610158 273 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AC107075.1-201ENST00000613695 314 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 AC009268.2-201ENST00000621925 457 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 Z99571.1-201ENST00000636677 394 ntBASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC112Q8NEF3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 Y_RNA.238-201ENST00000364441 102 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 U8.10-201ENST00000384260 133 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 RNU6-1122P-201ENST00000384449 107 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 RNU6-114P-201ENST00000384704 105 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 AL590084.2-201ENST00000401481 382 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 AL021407.1-201ENST00000404531 386 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 TXNP7-201ENST00000406296 293 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 RNA5SP247-201ENST00000411181 105 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 AL358453.1-201ENST00000422522 250 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 AC087884.1-201ENST00000469738 328 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 AC021382.1-201ENST00000483523 359 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 SMURF2P1-201ENST00000514992 481 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 RNA5SP61-201ENST00000516453 100 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 AP005597.4-201ENST00000526762 229 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 OR6C7P-201ENST00000547875 934 ntBASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.63□□□□□ -2.15
CCDC112Q8NEF3 TUG1_2.1-201ENST00000614234 87 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms