Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AC087650.1-201ENST00000431445 468 ntBASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 AL121871.1-201ENST00000443413 436 ntBASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 AC002553.2-201ENST00000453217 340 ntBASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 RPL37P6-201ENST00000460682 294 ntBASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 AC126177.3-201ENST00000551839 688 ntBASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 AP001005.3-201ENST00000622049 129 ntBASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 IPO8P1-201ENST00000455509 3109 ntBASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LINC00116Q8NCU8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 Y_RNA.500-201ENST00000384466 111 ntBASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 Y_RNA.556-201ENST00000384677 113 ntBASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 RNU6-55P-201ENST00000411092 107 ntBASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 EIF4EP1-201ENST00000422311 642 ntBASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 AL138785.1-201ENST00000425821 331 ntBASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 AL645568.3-201ENST00000433683 316 ntBASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 AC008264.1-201ENST00000447612 367 ntBASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 AC068781.1-201ENST00000488231 618 ntBASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 MIR5680-201ENST00000577577 84 ntBASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 MIR4513-201ENST00000581077 86 ntBASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LINC00116Q8NCU8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 U3.19-201ENST00000390893 196 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 RNU6-817P-201ENST00000391083 104 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 RNU2-23P-201ENST00000410545 195 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 RPL21P90-201ENST00000415692 466 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 UBE2V1P4-201ENST00000425374 344 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 AL590399.6-201ENST00000446396 307 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 RPL21P41-201ENST00000459863 264 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 AC009901.1-201ENST00000506703 541 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 RN7SKP258-201ENST00000517151 304 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 AC008489.1-201ENST00000524271 483 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 AC006272.2-201ENST00000594725 163 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 MIR4275-201ENST00000636486 87 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 AC011266.1-201ENST00000624119 3569 ntBASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00116Q8NCU8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 Y_RNA.39-201ENST00000362620 98 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 Y_RNA.151-201ENST00000363566 112 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 RNU6-371P-201ENST00000364283 108 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 Y_RNA.424-201ENST00000384063 103 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 RNU6-842P-201ENST00000384269 107 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 Y_RNA.480-201ENST00000384364 102 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 SNORA41-201ENST00000384675 132 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 RNU6-823P-201ENST00000391042 103 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 RNU6-1109P-201ENST00000391187 107 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 AC099799.1-201ENST00000439809 192 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 RPL7L1P1-201ENST00000448259 785 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 RNU7-187P-201ENST00000458985 68 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 RNU7-138P-201ENST00000459479 64 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 RPL31P60-201ENST00000478450 367 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 ERHP1-201ENST00000523006 310 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 HSBP1P1-201ENST00000555205 166 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 MIR5692A1-201ENST00000580523 69 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 ELOCP5-201ENST00000604924 333 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 MIR15A-201ENST00000607334 83 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 U2.1-201ENST00000618978 145 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms