Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 Y_RNA.100-201ENST00000363141 102 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 RNU6-778P-201ENST00000363269 103 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 RNU1-73P-201ENST00000383971 164 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 SKA2P1-201ENST00000425592 390 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC005326.1-201ENST00000429197 123 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 PRPS1P1-201ENST00000445305 876 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 RN7SL594P-201ENST00000470590 287 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 RPS29P20-201ENST00000489592 171 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC022493.1-201ENST00000492984 337 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC069439.1-201ENST00000494739 167 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC074344.1-201ENST00000512823 224 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC112206.3-201ENST00000514578 389 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 RNU2-69P-201ENST00000516061 100 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 RNU1-103P-201ENST00000516502 125 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 RNU6-703P-201ENST00000516946 107 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 SNORA31.19-201ENST00000517079 126 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 IGKV2-26-201ENST00000518305 343 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC009902.1-201ENST00000519351 183 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC118273.2-201ENST00000532092 465 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 MIR4782-201ENST00000577987 79 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC004852.3-201ENST00000614131 326 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC006504.8-201ENST00000621046 635 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AP003122.6-201ENST00000623831 495 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AP003400.5-201ENST00000624827 617 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 U6.99-201ENST00000637524 83 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 AC099654.14-201ENST00000638599 341 ntBASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF38AQ8NAV1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 RNA5SP42-201ENST00000364278 115 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 SNORA16.2-201ENST00000390991 127 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AL353621.1-201ENST00000418219 243 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 HSPE1P1-201ENST00000421494 318 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AC007560.1-201ENST00000426912 237 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AC005300.1-201ENST00000428401 373 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 MYL8P-204ENST00000431574 518 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AL078601.1-201ENST00000444542 271 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AL360271.2-201ENST00000447710 161 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 RNU6-1208P-201ENST00000459588 107 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AP002884.2-201ENST00000471647 395 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AC093663.1-201ENST00000497190 394 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 HIGD1AP13-201ENST00000509878 289 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 RNU6-572P-201ENST00000516724 80 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 OR11H5P-201ENST00000554039 926 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 MIR5583-1-201ENST00000580941 59 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 HMGN2P15-201ENST00000585707 270 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AC012119.1-201ENST00000603184 222 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AC007938.3-201ENST00000604965 623 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 BNIP3P10-201ENST00000605360 577 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 AC009033.1-201ENST00000624279 431 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 MIR3651-201ENST00000630427 90 ntBASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.03□□□□□ -1.76
PRPF38AQ8NAV1 MFSD8-233ENST00000641482 4860 ntBASIC4.03□□□□□ -1.77
PRPF38AQ8NAV1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 RNU6-525P-201ENST00000363685 104 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 SNORA75B-201ENST00000384053 137 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 SNORA40C-201ENST00000391285 128 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 POLHP1-201ENST00000411806 470 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 AC017079.2-201ENST00000416102 485 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 AL353729.1-201ENST00000425044 720 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 TOMM20P4-201ENST00000427861 435 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 HMGN2P26-201ENST00000463169 339 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 RNU6-189P-201ENST00000516120 101 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 RN7SKP83-201ENST00000516512 178 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 SNORA31.21-201ENST00000517180 77 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 TRAV37-201ENST00000553906 342 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 AC037471.2-201ENST00000564941 598 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 AC092807.2-201ENST00000609367 243 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms