Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL358794.1-201ENST00000445689 381 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 OR6C5P-201ENST00000452388 923 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 RPL21P134-201ENST00000453468 483 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 CYP2C59P-201ENST00000457790 269 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 RPL36AP48-201ENST00000485521 314 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC018437.1-201ENST00000492214 406 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC093281.2-201ENST00000510153 597 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 SMURF2P1-201ENST00000514992 481 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 RNU2-19P-201ENST00000517288 84 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AK6P1-201ENST00000540219 478 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AL049838.1-201ENST00000563647 981 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC090079.2-201ENST00000575289 768 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 MIR4529-201ENST00000578110 78 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AL355297.2-201ENST00000604792 129 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC116312.1-201ENST00000606841 314 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 MIR6845-201ENST00000613182 61 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 MTND5P33-201ENST00000571250 1450 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC099786.3-201ENST00000565735 1410 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 RNU6-1284P-201ENST00000363701 100 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 Y_RNA.465-201ENST00000384293 102 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 RNU6-278P-201ENST00000390945 109 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 RNU6-1000P-201ENST00000391066 106 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 SNORA46.1-201ENST00000391069 153 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 RN7SKP284-201ENST00000411002 343 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 ZNF90P2-204ENST00000419323 1075 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC009238.1-201ENST00000442165 424 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC009237.6-201ENST00000446969 424 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC092001.1-201ENST00000453012 261 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC116353.3-201ENST00000511215 249 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 SNORA31.3-201ENST00000516029 96 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC091163.3-201ENST00000518269 1144 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC007375.1-201ENST00000554513 578 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 MIR4419B-201ENST00000577260 68 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AL158827.2-201ENST00000602494 330 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AC025811.1-201ENST00000604312 472 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 SDR42E1P4-201ENST00000620894 481 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 AL691447.3-201ENST00000635020 330 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 U6.99-201ENST00000637524 83 ntBASIC1.59□□□□□ -2.15
ZIC4Q8N9L1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
ZIC4Q8N9L1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 ERHP2-201ENST00000402323 299 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AIMP1P2-201ENST00000425294 312 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 RSU1P2-202ENST00000437884 485 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 RNA5SP233-201ENST00000459153 113 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AC117503.1-201ENST00000472241 394 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AC107032.1-201ENST00000485945 480 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AC139453.3-201ENST00000493276 369 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 RPF2P2-201ENST00000504693 896 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AC116337.1-201ENST00000509680 687 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 RNU6-581P-201ENST00000516214 105 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 RNU6-295P-201ENST00000516901 104 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 RNU6-143P-201ENST00000516942 93 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 RNU6-1183P-201ENST00000517054 60 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 RNU6-64P-201ENST00000517119 105 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 EEF1A1P37-201ENST00000522748 715 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 MIR4298-201ENST00000584380 73 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 BNIP3P23-201ENST00000599655 511 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AC009233.1-201ENST00000616477 371 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AL162373.1-201ENST00000620433 407 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AC091932.3-201ENST00000624223 323 ntBASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AC106858.1-201ENST00000637497 429 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms