Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 RNU6-552P-201ENST00000362869 119 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 MIR493-201ENST00000385254 89 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 HSPE1P1-201ENST00000421494 318 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 MTCYBP8-201ENST00000422855 651 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 RPL7P46-201ENST00000425129 740 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 CALM2P2-201ENST00000428512 440 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 AL590383.1-201ENST00000428602 75 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 HMGB3P11-201ENST00000440127 604 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 MTCO3P18-201ENST00000440206 761 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 MTND1P18-201ENST00000448191 573 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 ELOCP23-201ENST00000452014 332 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 RPL31P58-201ENST00000469001 379 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 AC069439.1-201ENST00000494739 167 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 TTC39CP1-201ENST00000512513 755 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 AC008885.1-201ENST00000514930 301 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 PSMA2P1-201ENST00000526365 646 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 ATP5F1P5-201ENST00000526403 760 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 AL138976.2-201ENST00000563989 694 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 MTCO3P24-201ENST00000572729 782 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS52Q8N1B4 AC130324.3-201ENST00000614165 542 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 AC024940.5-201ENST00000622889 474 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 U6.114-201ENST00000636407 96 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 MTND1P37-201ENST00000636562 264 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 AC004520.1-201ENST00000608362 1413 ntBASIC3.42□□□□□ -1.86
VPS52Q8N1B4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS52Q8N1B4 RNU6-741P-201ENST00000383889 107 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 SNORA7.4-201ENST00000384249 137 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS52Q8N1B4 FGF7P8-201ENST00000402994 292 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 RNU2-33P-201ENST00000410344 192 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 RPS12P24-201ENST00000412619 387 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC092809.3-201ENST00000415453 231 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC012498.1-201ENST00000424037 437 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 HMGB1P27-201ENST00000431429 603 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS52Q8N1B4 RPS24P13-201ENST00000442520 397 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC009237.8-201ENST00000445492 379 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 WASF1P1-201ENST00000447560 1131 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 NFU1P2-201ENST00000448700 469 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS52Q8N1B4 RPS23P3-201ENST00000470993 430 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 RPL39P36-201ENST00000490784 156 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC116353.2-201ENST00000505332 712 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 RBBP4P6-201ENST00000508098 202 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC104806.1-201ENST00000508720 308 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 RNA5SP401-201ENST00000515920 127 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 RNU6-123P-201ENST00000516163 102 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 SNORD60.2-201ENST00000516883 86 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AL033523.1-201ENST00000605153 153 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC022893.3-201ENST00000607665 437 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 MIR7106-201ENST00000612419 65 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AL359547.2-201ENST00000615810 418 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC073476.4-201ENST00000628409 72 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AL354685.2-201ENST00000448218 1447 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 AC093536.2-201ENST00000565257 1406 ntBASIC3.41□□□□□ -1.86
VPS52Q8N1B4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS52Q8N1B4 RNU6-877P-201ENST00000383868 107 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 Y_RNA.534-201ENST00000384599 112 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 UBE2V1P2-201ENST00000397758 440 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 RNU6-193P-201ENST00000410977 107 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS52Q8N1B4 AL591212.2-201ENST00000433923 257 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 CST9LP2-201ENST00000437612 320 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS52Q8N1B4 RPL30P5-201ENST00000494923 336 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 RPL38P4-201ENST00000502376 214 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 PRDX4P1-201ENST00000507189 574 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS52Q8N1B4 Y_RNA.689-201ENST00000516589 107 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 RNA5SP471-201ENST00000516971 106 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS52Q8N1B4 AC134698.4-201ENST00000523451 826 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS52Q8N1B4 SUB1P1-201ENST00000524415 382 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 RANP3-201ENST00000530970 276 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS52Q8N1B4 ADI1P3-201ENST00000549509 470 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms