Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 AP001642.1-201ENST00000624727 2117 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 RNU6-288P-201ENST00000363690 104 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 Y_RNA.297-201ENST00000364950 91 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 RNU6-1203P-201ENST00000410703 110 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 HSPE1P12-201ENST00000412576 301 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 RPS15AP6-201ENST00000420703 385 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 SNORA31.6-201ENST00000516241 130 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 AP001282.2-201ENST00000616149 309 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 U73479.1-201ENST00000618062 168 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 AL354798.1-201ENST00000622505 329 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 AC005183.1-201ENST00000603687 1979 ntBASIC4.13□□□□□ -1.75
TMEFF1Q8IYR6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 AC092435.4-201ENST00000623012 4159 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 Y_RNA.84-201ENST00000363011 104 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 Y_RNA.105-201ENST00000363182 111 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 RNU6-356P-201ENST00000384140 107 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 Y_RNA.464-201ENST00000384282 110 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 RNU1-44P-201ENST00000384453 163 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 MIR628-201ENST00000385229 95 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 SNORD66.1-201ENST00000391230 76 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 SNORD58.1-201ENST00000391313 66 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 RNU6-121P-201ENST00000410525 99 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 RPL21P38-201ENST00000418090 167 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 AC096920.1-201ENST00000423991 241 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 UBE2D3P2-201ENST00000424409 445 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 AL138752.1-201ENST00000452964 351 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 RN7SL429P-201ENST00000479090 223 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 RN7SL489P-201ENST00000486185 223 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 RN7SL327P-201ENST00000488659 223 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 AC104164.2-201ENST00000496953 495 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 RNU4-71P-201ENST00000516258 113 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 MIR5195-201ENST00000583555 115 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 AC010900.2-201ENST00000604508 210 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 AC005000.2-201ENST00000605468 310 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 MIR15A-201ENST00000607334 83 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 MIR1244-1-201ENST00000612829 85 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 RN7SL853P-201ENST00000617250 223 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 FP236240.3-201ENST00000623061 327 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 MIR1244-3-201ENST00000635744 85 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 MIR1244-2-201ENST00000636449 85 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 MIR1244-4-202ENST00000636813 85 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 MIR6715B-201ENST00000637172 77 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 Z82217.1-201ENST00000625157 8149 ntBASIC4.12□□□□□ -1.75
TMEFF1Q8IYR6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 AL391987.6-201ENST00000305671 199 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 Y_RNA.274-201ENST00000364714 101 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 Y_RNA.352-201ENST00000365439 102 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 RNU6-933P-201ENST00000384424 107 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 SNORA69.1-201ENST00000390904 137 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 RNU6-325P-201ENST00000411132 105 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 AP000275.1-201ENST00000411943 390 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 RAB9AP3-201ENST00000412737 573 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 BX842559.1-201ENST00000419615 532 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 AC007098.1-201ENST00000420122 367 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 EIF4EP2-201ENST00000422816 654 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 RPEP5-201ENST00000441137 268 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 RAB9AP1-201ENST00000449393 573 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 MTND3P25-201ENST00000509243 135 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 AC113155.1-201ENST00000511141 769 ntBASIC4.11□□□□□ -1.75
TMEFF1Q8IYR6 SNORA31.3-201ENST00000516029 96 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms