Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-169P-201ENST00000365336 107 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 Y_RNA.553-201ENST00000384670 102 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 RNU2-39P-201ENST00000410604 198 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC092809.3-201ENST00000415453 231 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 SKA2P1-201ENST00000425592 390 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 RPL31P35-201ENST00000431058 377 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 RPL23AP30-201ENST00000432419 501 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 KATNBL1P3-201ENST00000443475 909 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AL360221.1-201ENST00000445989 335 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 FABP5P13-201ENST00000452144 328 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC010424.1-201ENST00000506336 297 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 ARL2BPP4-201ENST00000506854 471 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 OR5B19P-201ENST00000531766 928 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 HSPE1P20-201ENST00000538133 289 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 PIGPP4-201ENST00000584447 307 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC007621.1-201ENST00000604544 437 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 MIR98-201ENST00000606724 119 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC002064.3-201ENST00000623448 346 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 Z99571.1-201ENST00000636677 394 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 U2.21-201ENST00000637295 81 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 RNA5SP456-201ENST00000364002 114 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 RNU1-73P-201ENST00000383971 164 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 RNU6-641P-201ENST00000384006 107 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC114491.1-201ENST00000416095 246 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AL096701.2-201ENST00000416920 238 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 MTND3P17-201ENST00000416968 344 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC009963.1-201ENST00000417265 157 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 BX295541.1-201ENST00000417774 250 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC009414.1-201ENST00000427200 443 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 GTF2IP20-201ENST00000431663 360 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AL353706.1-201ENST00000436728 494 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AL031667.1-201ENST00000440222 725 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 MTCO1P19-201ENST00000443487 500 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 WASF1P1-201ENST00000447560 1131 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC139453.3-201ENST00000493276 369 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC093534.1-201ENST00000504977 132 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC117522.1-201ENST00000509821 380 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 SCARNA24.1-201ENST00000516465 137 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 Y_RNA.689-201ENST00000516589 107 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 RPL7P20-201ENST00000520308 745 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 MIR3913-1-201ENST00000577744 102 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AP005136.1-201ENST00000579765 429 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 RSL24D1P11-201ENST00000591045 491 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC008739.2-201ENST00000597006 317 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC245014.2-201ENST00000603689 287 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC246785.4-201ENST00000605374 287 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC010678.1-201ENST00000614118 713 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AL512643.1-201ENST00000635735 524 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC090582.1-201ENST00000636321 199 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 ZNF271P-202ENST00000465539 1970 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AC099654.7-201ENST00000635788 2127 ntBASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
C9orf40Q8IXQ3 AL390237.1-201ENST00000404226 1415 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 Y_RNA.22-201ENST00000362492 102 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 DEFA7P-201ENST00000382676 285 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms