Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU6-174P-201ENST00000410406 106 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AL117339.2-201ENST00000430475 180 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AL358472.1-201ENST00000431295 329 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 RPL26P9-201ENST00000457466 433 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 SNORA84-201ENST00000459229 133 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 snoU109.2-201ENST00000459316 135 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 RPL30P14-201ENST00000482744 348 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 RPL32P34-201ENST00000486380 400 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AC006445.2-201ENST00000510061 472 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 SYF2P1-201ENST00000550658 413 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AMZ2P1-203ENST00000565833 850 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 CPDP1-201ENST00000579660 283 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 RN7SL600P-201ENST00000581811 299 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 MIR3128-201ENST00000581957 66 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 MIR6867-201ENST00000610636 67 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 FAM27D1-201ENST00000612308 341 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 U2.21-201ENST00000637295 81 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AC233263.6-201ENST00000631132 1963 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 AC010615.1-201ENST00000594254 1764 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 AC007656.2-201ENST00000624902 4547 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 RNU1-83P-201ENST00000363426 164 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 RNA5SP175-201ENST00000364275 119 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 RNA5SP283-201ENST00000365604 119 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 Y_RNA.461-201ENST00000384263 103 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 RNU6-713P-201ENST00000384761 107 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 MT-TW-201ENST00000387382 68 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 RPL21P1-201ENST00000399532 476 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 Z74021.1-201ENST00000423610 407 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 AC006946.1-201ENST00000429106 328 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 RN7SKP40-201ENST00000517211 242 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 AC107016.1-201ENST00000550463 337 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 AC103996.1-201ENST00000555468 102 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 AC006130.2-201ENST00000586202 326 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 MIR92B-201ENST00000607575 96 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 MIR8076-201ENST00000611401 83 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 AL021997.2-201ENST00000615674 271 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 AC141273.2-201ENST00000618989 130 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 U2.22-201ENST00000636441 106 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 U4.7-201ENST00000638126 106 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 ZNF72P-201ENST00000425869 1908 ntBASIC4.7□□□□□ -1.66
NPAS4Q8IUM7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AL133243.3-201ENST00000617415 3004 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 RNU1-14P-201ENST00000362759 152 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 RNU6-78P-201ENST00000362897 107 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 U8.8-201ENST00000365399 135 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 Y_RNA.350-201ENST00000365409 98 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 RNU1-63P-201ENST00000383902 164 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 MIR1252-201ENST00000408861 65 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 RNA5SP36-201ENST00000410197 133 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 RNA5SP31-201ENST00000411144 127 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AC009237.10-201ENST00000414112 510 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AL157831.1-201ENST00000426134 473 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 COX6B1P7-201ENST00000430845 235 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AL590664.1-201ENST00000448065 339 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AL451050.1-201ENST00000450126 415 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AC013470.1-201ENST00000453438 462 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 SNORD127-201ENST00000458892 86 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 RPL23AP49-201ENST00000492925 468 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AC022447.4-201ENST00000504053 364 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AC105758.1-201ENST00000506038 399 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 HMGB3P16-201ENST00000508037 287 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms