Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC114797.1-201ENST00000514003 728 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.97□□□□□ -1.93
NPHP3Q7Z494 MIR3146-201ENST00000580367 79 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.97□□□□□ -1.93
NPHP3Q7Z494 HMGN1P30-201ENST00000589286 268 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AC073544.2-201ENST00000601155 540 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AC025594.3-201ENST00000613068 790 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AC013476.2-201ENST00000614456 459 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AC091953.2-201ENST00000623979 160 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AL603839.4-201ENST00000624658 1005 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AC099654.13-201ENST00000639774 207 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 API5P2-201ENST00000397055 1498 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.97□□□□□ -1.93
NPHP3Q7Z494 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.97□□□□□ -1.93
NPHP3Q7Z494 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
NPHP3Q7Z494 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
NPHP3Q7Z494 MIR21-201ENST00000362134 72 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 RNU6-741P-201ENST00000383889 107 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 AL109755.1-201ENST00000401791 649 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 FCF1P10-201ENST00000407590 479 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 RNU2-2P-201ENST00000410396 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 Y_RNA.598-201ENST00000410480 95 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 AC099548.1-201ENST00000421443 426 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.96□□□□□ -1.93
NPHP3Q7Z494 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.96□□□□□ -1.93
NPHP3Q7Z494 PIGFP3-201ENST00000441918 722 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 AL022238.1-201ENST00000442557 355 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 ELOCP30-201ENST00000447108 299 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.96□□□□□ -1.93
NPHP3Q7Z494 RPL31P3-201ENST00000458430 332 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 RNU7-59P-201ENST00000459101 61 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 RPL23AP41-201ENST00000484754 458 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.96□□□□□ -1.93
NPHP3Q7Z494 SCARNA17.1-201ENST00000516211 143 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 SCARNA17.2-201ENST00000516334 143 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 RNU6-64P-201ENST00000517119 105 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 AC007115.1-201ENST00000546853 234 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 AF038458.1-201ENST00000588406 262 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 AC023043.2-201ENST00000589678 1026 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.15-201ENST00000611544 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.16-201ENST00000613119 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.12-201ENST00000613778 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.20-201ENST00000613956 192 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 SCARNA17.4-201ENST00000614296 143 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.9-201ENST00000615427 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.11-201ENST00000616345 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.2-201ENST00000616535 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.3-201ENST00000617785 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.19-201ENST00000618602 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 RNU2-1-201ENST00000618664 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.6-201ENST00000619225 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.5-201ENST00000619465 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 U2.10-201ENST00000620268 191 ntBASIC2.96□□□□□ -1.93
NPHP3Q7Z494 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPHP3Q7Z494 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.96□□□□□ -1.94
NPHP3Q7Z494 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPHP3Q7Z494 FGF7P2-201ENST00000332473 296 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 Y_RNA.77-201ENST00000362962 107 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 RNU5A-8P-201ENST00000364102 114 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 RNU4-40P-201ENST00000364351 143 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 SNORA40.3-201ENST00000390964 122 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 TXNP7-201ENST00000406296 293 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 MIR1287-201ENST00000408492 90 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 RPL21P24-201ENST00000413752 448 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 SEPT2P1-201ENST00000419651 180 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AL365338.1-201ENST00000422282 858 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 HMGN2P30-201ENST00000423237 256 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 Z82210.1-201ENST00000440037 231 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 USP9YP29-201ENST00000445112 563 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AL360221.1-201ENST00000445989 335 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 RNA5SP269-201ENST00000459032 137 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AC098799.2-201ENST00000509466 868 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 DEFB108A-201ENST00000530110 222 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 TRAV28-201ENST00000557548 323 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AC002545.1-201ENST00000592511 181 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AC008739.2-201ENST00000597006 317 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 DUXAP4-201ENST00000603046 613 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AC121334.2-201ENST00000605387 271 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AC090970.3-201ENST00000612566 866 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AC010133.1-201ENST00000615809 842 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
NPHP3Q7Z494 AC010680.1-201ENST00000590024 3590 ntBASIC2.95□□□□□ -1.94
NPHP3Q7Z494 RN7SKP226-201ENST00000364912 300 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 RNY3P13-201ENST00000365542 102 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 RNU6-297P-201ENST00000384636 107 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 RNU6-278P-201ENST00000390945 109 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms