Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC171Q6TFL3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 RNU6-251P-201ENST00000363235 104 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AL121978.1-201ENST00000402778 359 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 RPS27P1-201ENST00000450552 247 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AC117503.1-201ENST00000472241 394 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AC008837.2-201ENST00000513076 418 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 SNORA4.4-201ENST00000515921 135 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AC011604.1-201ENST00000545978 196 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 MIR151B-201ENST00000584249 96 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AC021646.1-201ENST00000605469 484 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AC009974.1-201ENST00000608881 455 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 RMST_2.1-201ENST00000617263 136 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 MIR3199-2-201ENST00000636243 86 ntBASIC1.13□□□□□ -2.23
CCDC171Q6TFL3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 TEX21P-201ENST00000447107 1476 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 MIR424-201ENST00000362227 98 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 RNU6-884P-201ENST00000363889 107 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 SNORA51.6-201ENST00000384151 125 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 MIR7-1-201ENST00000384871 110 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 AL139098.1-201ENST00000407291 389 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 AC009310.1-201ENST00000414414 451 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 MTND2P21-201ENST00000436242 1042 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 RNA5SP220-201ENST00000516298 104 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 SNORA31.16-201ENST00000516773 139 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 AL020997.3-201ENST00000602843 359 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 AL512643.1-201ENST00000635735 524 ntBASIC1.12□□□□□ -2.23
CCDC171Q6TFL3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 RNU6-140P-201ENST00000384566 108 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 MIR532-201ENST00000385025 91 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AL449283.1-202ENST00000418249 604 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AL078601.1-201ENST00000444542 271 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 CYP2C59P-201ENST00000457790 269 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AC099513.1-201ENST00000490423 301 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 SNORA31.22-201ENST00000517204 135 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AC034114.1-201ENST00000520293 285 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AC026271.5-201ENST00000577873 130 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 GAS5-AS1-201ENST00000602767 694 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AC107905.1-201ENST00000616204 426 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 MIR5739-201ENST00000619803 80 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 MIR6734-201ENST00000621166 68 ntBASIC1.11□□□□□ -2.23
CCDC171Q6TFL3 AC110491.1-201ENST00000562191 2010 ntBASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 SNORD19.2-201ENST00000516978 73 ntBASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 AC023825.1-201ENST00000566704 1030 ntBASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 VN1R107P-201ENST00000601784 209 ntBASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 AC211469.2-201ENST00000605461 205 ntBASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 DUXAP10-204ENST00000612052 616 ntBASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 MIR6788-201ENST00000618842 66 ntBASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 AC099842.1-201ENST00000619919 596 ntBASIC1.1□□□□□ -2.23
CCDC171Q6TFL3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
CCDC171Q6TFL3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CCDC171Q6TFL3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 SRIP3-201ENST00000413200 219 ntBASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 AL691517.1-201ENST00000440833 1235 ntBASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 RPL39P29-201ENST00000447779 157 ntBASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 FABP5P5-201ENST00000515537 406 ntBASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 RNA5SP291-201ENST00000517222 105 ntBASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 RPL21P5-201ENST00000554662 472 ntBASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 AC019288.1-201ENST00000557918 224 ntBASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 MTCYBP22-201ENST00000603788 447 ntBASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC171Q6TFL3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms