Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AL590639.1-201ENST00000456484 337 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AC117503.1-201ENST00000472241 394 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 RPL7P20-201ENST00000520308 745 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AC023050.3-201ENST00000541142 333 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AC106782.4-201ENST00000568264 210 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 RPL23AP78-201ENST00000599928 470 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AC092747.3-201ENST00000603769 301 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 CTHRC1P1-201ENST00000605383 469 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AC002044.1-201ENST00000606707 158 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AL031601.2-202ENST00000622650 282 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AC099654.14-201ENST00000638599 341 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AC121333.1-201ENST00000567488 2709 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 Y_RNA.126-201ENST00000363382 111 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 RNA5SP515-201ENST00000364570 118 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AL512633.1-201ENST00000399931 655 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AL122016.1-201ENST00000403365 367 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 SNORA57.3-201ENST00000411095 141 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 RNU6-373P-201ENST00000411247 98 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AL139413.1-201ENST00000421309 217 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 RPL7P37-201ENST00000425095 738 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AL158071.1-201ENST00000430315 461 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AC091286.1-201ENST00000431233 461 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 MTCO3P18-201ENST00000440206 761 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 NIPA2P5-201ENST00000452282 464 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 RPL31P58-201ENST00000469001 379 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AC074344.1-201ENST00000512823 224 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 RNU6-189P-201ENST00000516120 101 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 MIR892C-201ENST00000516410 77 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AC007151.1-201ENST00000572774 483 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AC011471.1-201ENST00000585766 187 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AC005261.5-201ENST00000596280 355 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AC010620.2-201ENST00000600135 313 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AL391813.1-201ENST00000603098 260 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 ATP1B3P1-201ENST00000605365 821 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 AC087045.1-201ENST00000605856 382 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 U2.17-201ENST00000611454 95 ntBASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PPP4R4Q6NUP7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 Y_RNA.86-201ENST00000363020 111 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 Y_RNA.157-201ENST00000363638 102 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 RNA5SP399-201ENST00000364003 117 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 RNA5SP97-201ENST00000365006 84 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 RNU6-898P-201ENST00000365627 104 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 MT-TL1-201ENST00000386347 75 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 RPLP0P7-201ENST00000416050 667 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AL161651.1-201ENST00000440882 223 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 BTF3P15-201ENST00000455606 336 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AP000852.1-201ENST00000472460 573 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AC084198.1-201ENST00000477747 402 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 RN7SL132P-201ENST00000478131 296 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AC083904.1-201ENST00000487828 231 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 HMGB1P30-201ENST00000492455 606 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 PRDX4P1-201ENST00000507189 574 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 MRPS36P2-201ENST00000512569 299 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 PHBP14-201ENST00000512887 367 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 RNA5SP179-201ENST00000517284 121 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AL121821.2-201ENST00000556081 394 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AC091152.3-201ENST00000604227 325 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AC021646.1-201ENST00000605469 484 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AL136221.1-201ENST00000621449 509 ntBASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.6□□□□□ -1.83
PPP4R4Q6NUP7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 250.1 ms