Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC025594.3-201ENST00000613068 790 ntBASIC2.35□□□□□ -2.03
ATL3Q6DD88 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 AC079416.3-201ENST00000624479 549 ntBASIC2.35□□□□□ -2.03
ATL3Q6DD88 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
ATL3Q6DD88 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ATL3Q6DD88 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
ATL3Q6DD88 RNU2-68P-201ENST00000410878 191 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.34□□□□□ -2.03
ATL3Q6DD88 AL365184.2-201ENST00000431139 435 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 MTCYBP39-201ENST00000437562 491 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 USP9YP8-201ENST00000441913 500 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 IPO7P1-201ENST00000442031 636 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.34□□□□□ -2.03
ATL3Q6DD88 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
ATL3Q6DD88 AC068587.2-201ENST00000478386 781 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 MTCYBP35-201ENST00000503630 1137 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 AC116347.2-201ENST00000514912 523 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 IGKV3-31-201ENST00000523109 329 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.34□□□□□ -2.03
ATL3Q6DD88 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.34□□□□□ -2.03
ATL3Q6DD88 ZNF321P-202ENST00000550843 495 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.34□□□□□ -2.03
ATL3Q6DD88 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.34□□□□□ -2.03
ATL3Q6DD88 MIR3935-201ENST00000583472 104 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 AL391813.1-201ENST00000603098 260 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 MTCYBP22-201ENST00000603788 447 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 AC034229.4-201ENST00000607861 441 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 AC005332.10-201ENST00000612725 619 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 DUSP12P1-201ENST00000612874 516 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.34□□□□□ -2.03
ATL3Q6DD88 uc_338.12-201ENST00000616344 181 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 AC068057.2-201ENST00000624047 895 ntBASIC2.34□□□□□ -2.03
ATL3Q6DD88 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.34□□□□□ -2.03
ATL3Q6DD88 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
ATL3Q6DD88 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.34□□□□□ -2.04
ATL3Q6DD88 AC004520.1-201ENST00000608362 1413 ntBASIC2.34□□□□□ -2.04
ATL3Q6DD88 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 UBE2L2-201ENST00000254302 429 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 RNU6-511P-201ENST00000363496 107 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 RNU1-91P-201ENST00000364746 163 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 RNY3P13-201ENST00000365542 102 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 BTF3L4P3-201ENST00000418879 476 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 AC118469.1-201ENST00000442943 488 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 TRBV1-201ENST00000476502 284 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 RPL23AP94-201ENST00000512518 302 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 RNU6-703P-201ENST00000516946 107 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATL3Q6DD88 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATL3Q6DD88 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 PCMTD1P2-201ENST00000565017 355 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 MTATP6P24-201ENST00000576835 677 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 AL358072.1-201ENST00000604156 575 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 AC018638.7-201ENST00000605836 1114 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 AC090970.3-201ENST00000612566 866 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 AL589743.7-201ENST00000612637 233 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 AL356266.1-201ENST00000623311 483 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 AC008993.2-201ENST00000631744 806 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 ZNF355P-201ENST00000427301 3216 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 MTND5P30-201ENST00000452896 1731 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ATL3Q6DD88 AL445523.1-201ENST00000451184 1362 ntBASIC2.33□□□□□ -2.04
ATL3Q6DD88 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.33□□□□□ -2.04
ATL3Q6DD88 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
ATL3Q6DD88 RNU6-188P-201ENST00000364207 107 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 RNU6-701P-201ENST00000384059 107 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 NDUFS5P1-201ENST00000405668 289 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 HMGN2P38-201ENST00000423806 265 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 AC007560.1-201ENST00000426912 237 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.32□□□□□ -2.04
ATL3Q6DD88 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.32□□□□□ -2.04
ATL3Q6DD88 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.32□□□□□ -2.04
ATL3Q6DD88 MTATP6P7-201ENST00000453315 681 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.32□□□□□ -2.04
ATL3Q6DD88 RNA5SP165-201ENST00000517142 115 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.32□□□□□ -2.04
ATL3Q6DD88 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.32□□□□□ -2.04
ATL3Q6DD88 ARL2BPP2-201ENST00000550907 489 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 ZNF519P3-201ENST00000557158 1032 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.32□□□□□ -2.04
ATL3Q6DD88 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.32□□□□□ -2.04
ATL3Q6DD88 MIR7844-201ENST00000616161 122 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 AC091953.2-201ENST00000623979 160 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.32□□□□□ -2.04
ATL3Q6DD88 AC080128.1-201ENST00000474389 1917 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 AC092881.1-201ENST00000638218 2733 ntBASIC2.32□□□□□ -2.04
ATL3Q6DD88 ZNF658B-202ENST00000615961 3375 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 RNU6-501P-201ENST00000364072 100 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms